RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	MRPS18B	Q9Y676	258 aa	Known RBP	13.29	□□□□□ -0.28
CHFR-223	ENST00000544268	EXPH5	Q8NEV8	1989 aa		13.29	□□□□□ -0.28
CHFR-223	ENST00000544268	CNOT1	A5YKK6	2376 aa	Known RBP	13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	GGT3P	A6NGU5	568 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268		H7C417	338 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	DXO	O77932	396 aa	Known RBP	13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	PPT1	P50897	306 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	POLR2H	P52434	150 aa	Known RBP	13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	RPP30	P78346	268 aa	Known RBP	13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	DEFA6	Q01524	100 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	SRSF4	Q08170	494 aa	Known RBP	13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	SPOCK1	Q08629	439 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	ZNF679	Q8IYX0	411 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	OR5L2	Q8NGL0	311 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	ASB5	Q8WWX0	329 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	NEU1	Q99519	415 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	TXNIP	Q9H3M7	391 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	C1orf198	Q9H425	327 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	ACKR4	Q9NPB9	350 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	TMEM100	Q9NV29	134 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	MTFP1	Q9UDX5	166 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.28	□□□□□ -0.28
CHFR-223	ENST00000544268		A0A1W2PQD3	144 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	RNF222	A6NCQ9	220 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	MS4A18	H0YCH9	400 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	XRCC3	O43542	346 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	OR2J2	O76002	312 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	PMS2P2	O95744	297 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	CD3D	P04234	171 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	NDUFB7	P17568	137 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	TAS2R60	P59551	318 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	EIF3I	Q13347	325 aa	Known RBP	13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	MS4A18	Q3C1V0	323 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	MOGAT2	Q3SYC2	334 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	DMRTC1	Q5HYR2	192 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	OR51S1	Q8NGJ8	323 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	FAM3D	Q96BQ1	224 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	IMMP1L	Q96LU5	166 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	DEFB126	Q9BYW3	111 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	TMPRSS5	Q9H3S3	457 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	TCFL5	Q9UL49	500 aa		13.28	□□□□□ -0.28
CHFR-223	ENST00000544268	SPAAR	A0A1B0GVQ0	90 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268		A8MVM7	634 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268		F5H0A9	414 aa	Predicted RBP	13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	MASP2	O00187	686 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	SLC31A2	O15432	143 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	IGHV2-5	P01817	119 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	CSF1	P09603	554 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	MUC1	P15941	1255 aa	Predicted RBP	13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	RCC1	P18754	421 aa	Predicted RBP	13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	RASGEF1B	Q0VAM2	473 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	SSX2	Q16385	188 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	GLYATL3	Q5SZD4	288 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	TMEM225	Q6GV28	225 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	SLC18B1	Q6NT16	456 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	RNF144B	Q7Z419	303 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	OR4A4P	Q8NGN8	299 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	RNF128	Q8TEB7	428 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	PAQR8	Q8TEZ7	354 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	CCDC107	Q8WV48	283 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	ATG5	Q9H1Y0	275 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	MMP26	Q9NRE1	261 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	FTCDNL1	E5RQL4	147 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	OR2T1	O43869	369 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	KLK2	P20151	261 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	DLST	P36957	453 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	NBL1	P41271	181 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	BEX5	Q5H9J7	111 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	ANKRD16	Q6P6B7	361 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	IL34	Q6ZMJ4	242 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	DCXR	Q7Z4W1	244 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	EXO5	Q9H790	373 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	COMMD9	Q9P000	198 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	RCC2	Q9P258	522 aa	Known RBP	13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	TMEM14A	Q9Y6G1	99 aa		13.27	□□□□□ -0.29
CHFR-223	ENST00000544268	PHF3	Q92576	2039 aa	Known RBP	13.26	□□□□□ -0.29
CHFR-223	ENST00000544268		A0A1W2PPE3	182 aa		13.26	□□□□□ -0.29
CHFR-223	ENST00000544268	EFNA2	O43921	213 aa		13.26	□□□□□ -0.29
CHFR-223	ENST00000544268	RAC2	P15153	192 aa		13.26	□□□□□ -0.29
CHFR-223	ENST00000544268	POU3F1	Q03052	451 aa	Predicted RBP	13.26	□□□□□ -0.29
CHFR-223	ENST00000544268	C9orf152	Q5JTZ5	239 aa		13.26	□□□□□ -0.29
CHFR-223	ENST00000544268	NKAPL	Q5M9Q1	402 aa		13.26	□□□□□ -0.29
CHFR-223	ENST00000544268	TMEM164	Q5U3C3	297 aa		13.26	□□□□□ -0.29
CHFR-223	ENST00000544268	GRINA	Q7Z429	371 aa		13.26	□□□□□ -0.29
CHFR-223	ENST00000544268	TMEM200A	Q86VY9	491 aa		13.26	□□□□□ -0.29
CHFR-223	ENST00000544268	STEAP2	Q8NFT2	490 aa		13.26	□□□□□ -0.29
CHFR-223	ENST00000544268	HIST1H2BA	Q96A08	127 aa		13.26	□□□□□ -0.29
CHFR-223	ENST00000544268	C14orf79	Q96F83	325 aa		13.26	□□□□□ -0.29
CHFR-223	ENST00000544268	VSX1	Q9NZR4	365 aa	Predicted RBP	13.26	□□□□□ -0.29
CHFR-223	ENST00000544268	DHDH	Q9UQ10	334 aa		13.26	□□□□□ -0.29
CHFR-223	ENST00000544268	ETV7	Q9Y603	341 aa		13.26	□□□□□ -0.29
CHFR-223	ENST00000544268		A0A1B0GTI1	187 aa		13.25	□□□□□ -0.29
CHFR-223	ENST00000544268	OR2AT4	A6NND4	320 aa		13.25	□□□□□ -0.29
CHFR-223	ENST00000544268		M0QYG6	137 aa		13.25	□□□□□ -0.29
CHFR-223	ENST00000544268	AHSA1	O95433	338 aa		13.25	□□□□□ -0.29
CHFR-223	ENST00000544268	FTH1P19	P0C7X4	201 aa		13.25	□□□□□ -0.29
CHFR-223	ENST00000544268	GTF2F2	P13984	249 aa		13.25	□□□□□ -0.29
CHFR-223	ENST00000544268	OTX2	P32243	289 aa		13.25	□□□□□ -0.29
CHFR-223	ENST00000544268	CASR	P41180	1078 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms