RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 IGLV3-27P01718 113 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 ZNF250P15622 560 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 GSTM3P21266 225 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 CNR1P21554 472 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 NUP62P37198 522 aaPredicted RBP2.54□□□□□ -2
SCFD1-207ENST00000544052 CCR8P51685 355 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 RAB10P61026 200 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 SNRPFP62306 86 aaKnown RBP2.54□□□□□ -2
SCFD1-207ENST00000544052 ZNF33AQ06730 810 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 PSG7Q13046 419 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 PNOCQ13519 176 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 PSG5Q15238 335 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 SGCAQ16586 387 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 KCTD19Q17RG1 926 aaPredicted RBP2.54□□□□□ -2
SCFD1-207ENST00000544052 LRRC10Q5BKY1 277 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 UNC93AQ86WB7 457 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 GABRG1Q8N1C3 465 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 OTUB2Q96DC9 234 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 ZNF396Q96N95 335 aaPredicted RBP2.54□□□□□ -2
SCFD1-207ENST00000544052 ZIM3Q96PE6 472 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 MED10Q9BTT4 135 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 MRPL37Q9BZE1 423 aaKnown RBP2.54□□□□□ -2
SCFD1-207ENST00000544052 ULBP1Q9BZM6 244 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 FBXO44Q9H4M3 255 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 RPF2Q9H7B2 306 aaKnown RBP2.54□□□□□ -2
SCFD1-207ENST00000544052 AUNIPQ9H7T9 357 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 PDFQ9HBH1 243 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 BEX1Q9HBH7 125 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 RETNQ9HD89 108 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 ACP6Q9NPH0 428 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 TMEM9BQ9NQ34 198 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 CISHQ9NSE2 258 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 DEC1Q9P2X7 70 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 COQ4Q9Y3A0 265 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 RHBDD3Q9Y3P4 386 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 F11RQ9Y624 299 aaKnown RBP2.54□□□□□ -2
SCFD1-207ENST00000544052 SPENQ96T58 3664 aaKnown RBP2.54□□□□□ -2
SCFD1-207ENST00000544052 MGAQ8IWI9 3026 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 GLYATL1P3A0A0U1RQE8 302 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 ZNF816-ZNF321PA0A0X1KG74 233 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 GABRR3A8MPY1 467 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 GOLGA8TH3BQL2 631 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 SIRPB1O00241 398 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 SLC9A3R1O14745 358 aaPredicted RBP2.54□□□□□ -2
SCFD1-207ENST00000544052 MRPS12O15235 138 aaKnown RBP2.54□□□□□ -2
SCFD1-207ENST00000544052 SLC31A2O15432 143 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 ZNF861PO60384 105 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 IGLV3-19P01714 112 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 IGHV4-34P06331 123 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 ACSM4P0C7M7 580 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 MYL2P10916 166 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 HPGDP15428 266 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 ELK1P19419 428 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 CD70P32970 193 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 NUDT1P36639 197 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 AQP2P41181 271 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 SLC1A1P43005 524 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 RAB9AP51151 201 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 SSR4P51571 173 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 BCAP31P51572 246 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 CRISP1P54107 249 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 UGT2B15P54855 530 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 LYZP61626 148 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 NUTF2P61970 127 aaKnown RBP2.54□□□□□ -2
SCFD1-207ENST00000544052 EIF4EBP2Q13542 120 aaPredicted RBP2.54□□□□□ -2
SCFD1-207ENST00000544052 GOLGA7BQ2TAP0 167 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 KRT71Q3SY84 523 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 HSP90B2PQ58FF3 399 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 SPECC1LQ69YQ0 1117 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 PQLC3Q8N755 202 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 PRELID2Q8N945 189 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 OR2G3Q8NGZ4 309 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 UBA3Q8TBC4 463 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 GABARAPL3Q9BY60 117 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 CCNB1IP1Q9NPC3 277 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 KCNJ16Q9NPI9 418 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 GPATCH2LQ9NWQ4 482 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 SLC25A37Q9NYZ2 338 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 STOML2Q9UJZ1 356 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 NOSIPQ9Y314 301 aaKnown RBP2.54□□□□□ -2
SCFD1-207ENST00000544052 GCN1Q92616 2671 aaKnown RBP2.53□□□□□ -2
SCFD1-207ENST00000544052 ATMQ13315 3056 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 TRAV25A0A0B4J276 109 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 NDUFS8O00217 210 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 IGLV3-25P01717 112 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 CRYGCP07315 174 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 KRTAP1-4P0C5Y4 121 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 DAOAP59103 153 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 RPS24P62847 133 aaKnown RBP2.53□□□□□ -2
SCFD1-207ENST00000544052 SLC25A11Q02978 314 aaKnown RBP2.53□□□□□ -2
SCFD1-207ENST00000544052 ADIGQ0VDE8 80 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 ITIH4Q14624 930 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 RSBN1Q5VWQ0 802 aaPredicted RBP2.53□□□□□ -2
SCFD1-207ENST00000544052 SYPL2Q5VXT5 272 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 FRMPD2BQ6IN97 320 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 ZNF621Q6ZSS3 439 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 IQCKQ8N0W5 287 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 FAM86B1Q8N7N1 296 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 ZFP41Q8N8Y5 198 aa2.53□□□□□ -2
SCFD1-207ENST00000544052 OR1N2Q8NGR9 330 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms