RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TUSC1Q2TAM9 212 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 GALMQ96C23 342 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 MISP3Q96FF7 219 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 A0A1B0GTQ1 180 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 DEFB108AA8MXU0 73 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 IDSB3KWA1 339 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 OR2A2Q6IF42 318 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 C16orf52Q8NHV5 167 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 CXorf58Q96LI9 332 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 RPL29P47914 159 aaKnown RBP13.94□□□□□ -0.18
CHD4-210ENST00000544040 NOVA1P51513 510 aaKnown RBP13.94□□□□□ -0.18
CHD4-210ENST00000544040 ADPRHP54922 357 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 C21orf62-AS1Q17RA5 79 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 FAM219BQ5XKK7 198 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 OR1A1Q9P1Q5 309 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 F5H697 171 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 GZMKP49863 264 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 PYCR3Q53H96 274 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 LRP11Q86VZ4 500 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 ANGPTL6Q8NI99 470 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 TXNIPQ9H3M7 391 aa13.94□□□□□ -0.18
CHD4-210ENST00000544040 ZNF195O14628 629 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 RRP8O43159 456 aaKnown RBP13.93□□□□□ -0.18
CHD4-210ENST00000544040 KRASP01116 189 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 CLN3Q13286 438 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 GAMTQ14353 236 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 PHOSPHO2Q8TCD6 241 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 RBM14Q96PK6 669 aaKnown RBP13.93□□□□□ -0.18
CHD4-210ENST00000544040 RAB7AP51149 207 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 RIMKLAQ8IXN7 391 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 C20orf196Q8IYI0 205 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 ZNF207O43670 478 aaKnown RBP13.93□□□□□ -0.18
CHD4-210ENST00000544040 Q56UQ5 140 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 COL13A1Q5TAT6 717 aaPredicted RBP13.93□□□□□ -0.18
CHD4-210ENST00000544040 FAM24BQ8N5W8 94 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 OR1L4Q8NGR5 311 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 CCL4L1Q8NHW4 92 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 SMIM12Q96EX1 92 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 OR2W5A6NFC9 320 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 CCKARP32238 428 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 TIAL1Q01085 375 aaKnown RBP eCLIP13.93□□□□□ -0.181e-9■■■■□ 25.7
CHD4-210ENST00000544040 PJVKQ0ZLH3 352 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 PARM1Q6UWI2 310 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 TMEM229BQ8NBD8 167 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 BCL2L2Q92843 193 aaPredicted RBP13.93□□□□□ -0.18
CHD4-210ENST00000544040 LSM2Q9Y333 95 aaKnown RBP13.93□□□□□ -0.18
CHD4-210ENST00000544040 H3BMH7 237 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 HPP00738 406 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 SLC37A1P57057 533 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 C19orf35Q6ZS72 473 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 SYS1Q8N2H4 156 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 C20orf141Q9NUB4 165 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 POMT1Q9Y6A1 747 aa13.93□□□□□ -0.18
CHD4-210ENST00000544040 SHISA8B8ZZ34 492 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 NEURL1O76050 574 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 SLC25A5P05141 298 aaKnown RBP13.92□□□□□ -0.18
CHD4-210ENST00000544040 SELENBP1Q13228 472 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 TOMM34Q15785 309 aaPredicted RBP13.92□□□□□ -0.18
CHD4-210ENST00000544040 ELFN2Q5R3F8 820 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 ADPRHL1Q8NDY3 354 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 NARFLQ9H6Q4 476 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 FZR1Q9UM11 496 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 FMN2Q9NZ56 1722 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 IFT172Q9UG01 1749 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 SPRY3O43610 288 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 TCTN3Q6NUS6 607 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 RTL10Q7L3V2 364 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 PRSS42Q7Z5A4 293 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.92□□□□□ -0.18
CHD4-210ENST00000544040 OR2G2Q8NGZ5 317 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 SLC25A19Q9HC21 320 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 HS3ST3A1Q9Y663 406 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 CRYAAP02489 173 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 POM121L2Q96KW2 1035 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 HES4Q9HCC6 221 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 ONECUT1Q9UBC0 465 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 MYH1P12882 1939 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 MYH4Q9Y623 1939 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 UPK1AO00322 258 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 IL2RAP01589 272 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 LIMS3P0CW19 117 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 LIMS4P0CW20 117 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 FGF8P55075 233 aaPredicted RBP13.92□□□□□ -0.18
CHD4-210ENST00000544040 MMP7P09237 267 aaPredicted RBP13.92□□□□□ -0.18
CHD4-210ENST00000544040 INSL4Q14641 139 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 ZNF385DQ9H6B1 395 aa13.92□□□□□ -0.18
CHD4-210ENST00000544040 GON4LQ3T8J9 2241 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 TOX3O15405 576 aaPredicted RBP13.91□□□□□ -0.18
CHD4-210ENST00000544040 FZD6O60353 706 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 CD27P26842 260 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 CHRNA7P36544 502 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 ZNF154Q13106 437 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 SHHQ15465 462 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 GLDNQ6ZMI3 551 aaPredicted RBP13.91□□□□□ -0.18
CHD4-210ENST00000544040 CLDN23Q96B33 292 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 ICAM5Q9UMF0 924 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 PRRG2O14669 202 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 ADAM20O43506 726 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 VAMP5O95183 116 aa13.91□□□□□ -0.18
CHD4-210ENST00000544040 ETHE1O95571 254 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms