RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 DNM1P34Q6PK57 102 aa21■□□□□ 0.95
SHD-201ENST00000543264 CLEC9AQ6UXN8 241 aa21■□□□□ 0.95
SHD-201ENST00000543264 GKN2Q86XP6 184 aa21■□□□□ 0.95
SHD-201ENST00000543264 OCSTAMPQ9BR26 566 aa21■□□□□ 0.95
SHD-201ENST00000543264 EIF5A2Q9GZV4 153 aaKnown RBP21■□□□□ 0.95
SHD-201ENST00000543264 RAB33BQ9H082 229 aa21■□□□□ 0.95
SHD-201ENST00000543264 MED29Q9NX70 200 aa21■□□□□ 0.95
SHD-201ENST00000543264 NPIPA1Q9UND3 350 aa21■□□□□ 0.95
SHD-201ENST00000543264 CPAMD8Q8IZJ3 1885 aa21■□□□□ 0.95
SHD-201ENST00000543264 CDC14BO60729 498 aa20.99■□□□□ 0.95
SHD-201ENST00000543264 JTBO76095 146 aa20.99■□□□□ 0.95
SHD-201ENST00000543264 RD3LP0DJH9 198 aa20.99■□□□□ 0.95
SHD-201ENST00000543264 RPS2P15880 293 aaKnown RBP20.99■□□□□ 0.95
SHD-201ENST00000543264 TNFRSF4P43489 277 aa20.99■□□□□ 0.95
SHD-201ENST00000543264 TMEM33P57088 247 aa20.99■□□□□ 0.95
SHD-201ENST00000543264 PNLDC1Q8NA58 520 aaKnown RBP20.99■□□□□ 0.95
SHD-201ENST00000543264 ZNF285Q96NJ3 590 aa20.99■□□□□ 0.95
SHD-201ENST00000543264 SOX7Q9BT81 388 aa20.99■□□□□ 0.95
SHD-201ENST00000543264 TMEM59Q9BXS4 323 aa20.99■□□□□ 0.95
SHD-201ENST00000543264 EHFQ9NZC4 300 aa20.99■□□□□ 0.95
SHD-201ENST00000543264 SRPK3Q9UPE1 567 aa20.99■□□□□ 0.95
SHD-201ENST00000543264 H0YIG0 161 aa20.99■□□□□ 0.95
SHD-201ENST00000543264 CRTAPO75718 401 aaPredicted RBP20.99■□□□□ 0.95
SHD-201ENST00000543264 EIF2S3P41091 472 aaKnown RBP20.99■□□□□ 0.95
SHD-201ENST00000543264 CSNK1EP49674 416 aaKnown RBP20.99■□□□□ 0.95
SHD-201ENST00000543264 CSNK2A1P68400 391 aaPredicted RBP20.99■□□□□ 0.95
SHD-201ENST00000543264 PCK2Q16822 640 aa20.99■□□□□ 0.95
SHD-201ENST00000543264 PPP1R3BQ86XI6 285 aa20.99■□□□□ 0.95
SHD-201ENST00000543264 CSNK2A3Q8NEV1 391 aa20.99■□□□□ 0.95
SHD-201ENST00000543264 FBLN5Q9UBX5 448 aa20.99■□□□□ 0.95
SHD-201ENST00000543264 ANAPC10Q9UM13 185 aa20.99■□□□□ 0.95
SHD-201ENST00000543264 MS4A18H0YCH9 400 aa20.98■□□□□ 0.95
SHD-201ENST00000543264 DHPSP49366 369 aaPredicted RBP20.98■□□□□ 0.95
SHD-201ENST00000543264 ZNF616Q08AN1 781 aa20.98■□□□□ 0.95
SHD-201ENST00000543264 MS4A18Q3C1V0 323 aa20.98■□□□□ 0.95
SHD-201ENST00000543264 LCN10Q6JVE6 187 aa20.98■□□□□ 0.95
SHD-201ENST00000543264 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.98■□□□□ 0.95
SHD-201ENST00000543264 KCNG3Q8TAE7 436 aa20.98■□□□□ 0.95
SHD-201ENST00000543264 SLC22A8Q8TCC7 542 aa20.98■□□□□ 0.95
SHD-201ENST00000543264 SPSB2Q99619 263 aa20.98■□□□□ 0.95
SHD-201ENST00000543264 GABRG3Q99928 467 aa20.98■□□□□ 0.95
SHD-201ENST00000543264 STARD10Q9Y365 291 aa20.98■□□□□ 0.95
SHD-201ENST00000543264 PHF3Q92576 2039 aaKnown RBP20.98■□□□□ 0.95
SHD-201ENST00000543264 GUK1Q16774 197 aa20.98■□□□□ 0.95
SHD-201ENST00000543264 LHFPL1Q86WI0 220 aa20.98■□□□□ 0.95
SHD-201ENST00000543264 SLC22A18ASQ8N1D0 253 aa20.98■□□□□ 0.95
SHD-201ENST00000543264 OR10H5Q8NGA6 315 aa20.98■□□□□ 0.95
SHD-201ENST00000543264 ASB10Q8WXI3 467 aa20.98■□□□□ 0.95
SHD-201ENST00000543264 TAAR9Q96RI9 348 aa20.98■□□□□ 0.95
SHD-201ENST00000543264 OSGIN2Q9Y236 505 aa20.98■□□□□ 0.95
SHD-201ENST00000543264 LSM5Q9Y4Y9 91 aaKnown RBP20.98■□□□□ 0.95
SHD-201ENST00000543264 ALG1L2C9J202 215 aa20.97■□□□□ 0.95
SHD-201ENST00000543264 SNCAP37840 140 aa20.97■□□□□ 0.95
SHD-201ENST00000543264 SNU13P55769 128 aaKnown RBP20.97■□□□□ 0.95
SHD-201ENST00000543264 NCMAPQ5T1S8 102 aa20.97■□□□□ 0.95
SHD-201ENST00000543264 C11orf40Q8WZ69 217 aa20.97■□□□□ 0.95
SHD-201ENST00000543264 SLC39A7Q92504 469 aa20.97■□□□□ 0.95
SHD-201ENST00000543264 TUBA4BQ9H853 241 aa20.97■□□□□ 0.95
SHD-201ENST00000543264 B4DGG1 531 aa20.97■□□□□ 0.95
SHD-201ENST00000543264 SLC2A1P11166 492 aa20.97■□□□□ 0.95
SHD-201ENST00000543264 GALNSP34059 522 aa20.97■□□□□ 0.95
SHD-201ENST00000543264 PLCXD2Q0VAA5 305 aa20.97■□□□□ 0.95
SHD-201ENST00000543264 HLA-DQA1Q5Y7H0 255 aa20.97■□□□□ 0.95
SHD-201ENST00000543264 LYPD6BQ8NI32 183 aa20.97■□□□□ 0.95
SHD-201ENST00000543264 C1orf147Q96MC9 270 aaPredicted RBP20.97■□□□□ 0.95
SHD-201ENST00000543264 GPER1Q99527 375 aa20.97■□□□□ 0.95
SHD-201ENST00000543264 B3GALT5Q9Y2C3 310 aa20.97■□□□□ 0.95
SHD-201ENST00000543264 A6NIZ1 184 aa20.96■□□□□ 0.95
SHD-201ENST00000543264 AP4M1O00189 453 aa20.96■□□□□ 0.95
SHD-201ENST00000543264 AKT2P31751 481 aa20.96■□□□□ 0.95
SHD-201ENST00000543264 HAAOP46952 286 aa20.96■□□□□ 0.95
SHD-201ENST00000543264 RAP1BP61224 184 aa20.96■□□□□ 0.95
SHD-201ENST00000543264 RAP1AP62834 184 aa20.96■□□□□ 0.95
SHD-201ENST00000543264 POU3F1Q03052 451 aaPredicted RBP20.96■□□□□ 0.95
SHD-201ENST00000543264 ZNF529Q6P280 563 aa20.96■□□□□ 0.95
SHD-201ENST00000543264 PARM1Q6UWI2 310 aa20.96■□□□□ 0.95
SHD-201ENST00000543264 FGF14Q92915 247 aa20.96■□□□□ 0.95
SHD-201ENST00000543264 EMC6Q9BV81 110 aa20.96■□□□□ 0.95
SHD-201ENST00000543264 FIGNL2A6NMB9 653 aa20.96■□□□□ 0.95
SHD-201ENST00000543264 NDUFS6O75380 124 aaKnown RBP20.96■□□□□ 0.95
SHD-201ENST00000543264 SCGB1D2O95969 90 aa20.96■□□□□ 0.95
SHD-201ENST00000543264 HCKP08631 526 aa20.96■□□□□ 0.95
SHD-201ENST00000543264 YPEL5P62699 121 aa20.96■□□□□ 0.95
SHD-201ENST00000543264 TDGQ13569 410 aa20.96■□□□□ 0.95
SHD-201ENST00000543264 GRINAQ7Z429 371 aa20.96■□□□□ 0.95
SHD-201ENST00000543264 FAM212BQ9NTI7 297 aaPredicted RBP20.96■□□□□ 0.95
SHD-201ENST00000543264 A0A1W2PPE2 198 aa20.95■□□□□ 0.95
SHD-201ENST00000543264 YKT6O15498 198 aa20.95■□□□□ 0.95
SHD-201ENST00000543264 RBMXP38159 391 aaKnown RBP20.95■□□□□ 0.95
SHD-201ENST00000543264 FAM3AP98173 230 aa20.95■□□□□ 0.95
SHD-201ENST00000543264 OR5AS1Q8N127 324 aa20.95■□□□□ 0.95
SHD-201ENST00000543264 OR10S1Q8NGN2 331 aa20.95■□□□□ 0.95
SHD-201ENST00000543264 CD300LFQ8TDQ1 290 aa20.95■□□□□ 0.95
SHD-201ENST00000543264 ZNF721Q8TF20 911 aa20.95■□□□□ 0.95
SHD-201ENST00000543264 KCNK17Q96T54 332 aa20.95■□□□□ 0.95
SHD-201ENST00000543264 GAPDHP04406 335 aaKnown RBP20.95■□□□□ 0.94
SHD-201ENST00000543264 CTSEP14091 401 aa20.95■□□□□ 0.94
SHD-201ENST00000543264 PTGER4P35408 488 aa20.95■□□□□ 0.94
SHD-201ENST00000543264 THBS4P35443 961 aa20.95■□□□□ 0.94
SHD-201ENST00000543264 PMELP40967 661 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms