RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 TMEM56Q96MV1 263 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 PRAP1Q96NZ9 151 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 OR2M2Q96R28 347 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 TNFRSF13CQ96RJ3 184 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 CITED1Q99966 193 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 KLHDC3Q9BQ90 382 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 THTPAQ9BU02 230 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 BEX2Q9BXY8 128 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 ULBP1Q9BZM6 244 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 STRADBQ9C0K7 418 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 ARV1Q9H2C2 271 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 DHX35Q9H5Z1 703 aaKnown RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 CLMPQ9H6B4 373 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 JPT2Q9H910 190 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 FN3KRPQ9HA64 309 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 MEAF6Q9HAF1 191 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 ELOVL3Q9HB03 270 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 ABCB9Q9NP78 766 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 TUBG2Q9NRH3 451 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 SPANXA1Q9NS26 97 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 DCAF13Q9NV06 445 aaKnown RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 C14orf105Q9NVL8 296 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 FBXL12Q9NXK8 326 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 ADA2Q9NZK5 511 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 THYN1Q9P016 225 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 STOX2Q9P2F5 926 aaPredicted RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 RIMS3Q9UJD0 308 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 GNG8Q9UK08 70 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 DKKL1Q9UK85 242 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 PITPNC1Q9UKF7 332 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 NPIPA1Q9UND3 350 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 NIP7Q9Y221 180 aaKnown RBP eCLIP2.6□□□□□ -1.99
USP28-210ENST00000542033 ANGPT4Q9Y264 503 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 GSTK1Q9Y2Q3 226 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 TBL2Q9Y4P3 447 aaKnown RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 HSPB11Q9Y547 144 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 CSAG2Q9Y5P2 127 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 ARL5AQ9Y689 179 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 TMEM56-RWDD3S4R434 201 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 KIF13AQ9H1H9 1805 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 FRMPD1Q5SYB0 1578 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 MROH1Q8NDA8 1641 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 RAPGEF6Q8TEU7 1601 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 MAP3K4Q9Y6R4 1608 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 KIF1AQ12756 1690 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 DCCP43146 1447 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 COL5A2P05997 1499 aaPredicted RBP2.59□□□□□ -1.99
USP28-210ENST00000542033 BICRAQ9NZM4 1560 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 TRBV11-1A0A0K0K1C0 115 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 A0A1W2PNV4 684 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 TMEM72A0PK05 275 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 C20orf202A1L168 122 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 OR11H12B2RN74 326 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 C5orf58C9J3I9 102 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 D6RAR5 112 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 E7EWF7 191 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 TMX2-CTNND1H3BSU7 103 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 K7ERU9 68 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 M0R036 132 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 PDCD5O14737 125 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 MSH4O15457 936 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 ZNF264O43296 627 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 ZNF749O43361 778 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 MBTPS2O43462 519 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 SCGNO76038 276 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 AQP8O94778 261 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 TNFSF15O95150 251 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 CYB5R3P00387 301 aaPredicted RBP2.59□□□□□ -1.99
USP28-210ENST00000542033 SERPINA1P01009 418 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 OR8U8P0C7N1 319 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 OR56A5P0C7T3 313 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 ANXA3P12429 323 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 FOLR1P15328 257 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 CD1DP15813 335 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 HLA-GP17693 338 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 SLC2A5P22732 501 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 IVDP26440 423 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 CD200P41217 278 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 GCLMP48507 274 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 EVX1P49640 407 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 RAB9AP51151 201 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 CCR8P51685 355 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 TDGF1P3P51864 188 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 RAG2P55895 527 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 NDUFV3P56181 108 aaKnown RBP2.59□□□□□ -1.99
USP28-210ENST00000542033 CLDN18P56856 261 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 SELENOTP62341 195 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 RPS15P62841 145 aaKnown RBP2.59□□□□□ -1.99
USP28-210ENST00000542033 SLC10A7Q0GE19 358 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 EIF2B1Q14232 305 aaKnown RBP2.59□□□□□ -1.99
USP28-210ENST00000542033 ZBTB6Q15916 424 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 TAF9Q16594 264 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 C18orf21Q32NC0 220 aaPredicted RBP2.59□□□□□ -1.99
USP28-210ENST00000542033 SMIM21Q3B7S5 101 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 ZNF404Q494X3 552 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 HIGD2BQ4VC39 106 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 UNC50Q53HI1 259 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 TCTEX1D4Q5JR98 221 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 NHLRC3Q5JS37 347 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 FAM182AQ5T1J6 154 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms