RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, human

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-218	ENST00000541615	PLAUR	Q03405	335 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	PPP1R8	Q12972	351 aa	Known RBP	4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	DOC2B	Q14184	412 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	RGN	Q15493	299 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	CEBPE	Q15744	281 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	ACKR1	Q16570	336 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	LINC00303	Q3SY05	128 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	CD300E	Q496F6	205 aa	Predicted RBP	4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	DUSP28	Q4G0W2	176 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	ZNF585B	Q52M93	769 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	HECTD2	Q5U5R9	776 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	C1QL3	Q5VWW1	255 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	KIAA0895L	Q68EN5	471 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	MRPL54	Q6P161	138 aa	Known RBP	4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	TMEM220	Q6QAJ8	160 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	WDR82	Q6UXN9	313 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	C12orf54	Q6X4T0	127 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	LINC00114	Q6XXX2	140 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	DNM1P46	Q6ZS02	220 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	TTLL10	Q6ZVT0	673 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	FA2H	Q7L5A8	372 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	TAS1R1	Q7RTX1	841 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	DPY19L4	Q7Z388	723 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	TMEM173	Q86WV6	379 aa	Predicted RBP	4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	FAM129C	Q86XR2	697 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	CLEC10A	Q8IUN9	316 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	PNPLA1	Q8N8W4	532 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	C2CD4A	Q8NCU7	369 aa	Predicted RBP	4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	LINC00116	Q8NCU8	138 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	OR5AU1	Q8NGC0	362 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	OR5A1	Q8NGJ0	315 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	OR2T27	Q8NH04	317 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	C1orf216	Q8TAB5	229 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	STAG3L4	Q8TBR4	150 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	UBTD2	Q8WUN7	234 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	PPP1R1C	Q8WVI7	109 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	OR10C1	Q96KK4	312 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	PGLYRP2	Q96PD5	576 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	UCN2	Q96RP3	112 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	GABRG3	Q99928	467 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	ZNF649	Q9BS31	505 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	MAP1LC3B	Q9GZQ8	125 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	TXNIP	Q9H3M7	391 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	A4GALT	Q9NPC4	353 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	PXMP2	Q9NR77	195 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	SLC7A10	Q9NS82	523 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	TMEM106B	Q9NUM4	274 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	SLAMF8	Q9P0V8	285 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	FUT9	Q9Y231	359 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	KCNK6	Q9Y257	313 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	B3GALT5	Q9Y2C3	310 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	HES2	Q9Y543	173 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	SLX4	Q8IY92	1834 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	DSPP	Q9NZW4	1301 aa		4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	BAZ2A	Q9UIF9	1905 aa	Known RBP	4.64	□□□□□ -1.67
SNHG1-218	ENST00000541615	QSER1	Q2KHR3	1735 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	AFDN	P55196	1824 aa	Known RBP	4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615		H3BQ15	152 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615		H7BYZ3	331 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	PYCARD-AS1	I3L0S3	204 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	SIRPB1	O00241	398 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	GRM6	O15303	877 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	ZNF207	O43670	478 aa	Known RBP	4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	FCMR	O60667	390 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	S1PR2	O95136	353 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	NUDT3	O95989	172 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	HAND1	O96004	215 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	SERPINA7	P05543	415 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	CD1A	P06126	327 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	PGA4	P0DJD7	388 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	PGA5	P0DJD9	388 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	PSMB5	P28074	263 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	S100A3	P33764	101 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	SREBF1	P36956	1147 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	TFPI2	P48307	235 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	GPM6A	P51674	278 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	LBX1	P52954	281 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	CAV3	P56539	151 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	TAS2R30	P59541	319 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	TAS2R20	P59543	309 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	LCN6	P62502	163 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	ADAM8	P78325	824 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	BTG2	P78543	158 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	TMEM267	Q0VDI3	215 aa	Predicted RBP	4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	DHRS2	Q13268	280 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	KIAA0040	Q15053	153 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	MMD	Q15546	238 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	PMCHL1	Q16048	86 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	FAM110C	Q1W6H9	321 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	C4orf17	Q53FE4	359 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	TRMT12	Q53H54	448 aa	Known RBP	4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	TMEM128	Q5BJH2	165 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	TCEAL5	Q5H9L2	206 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	ZNF648	Q5T619	568 aa	Predicted RBP	4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	RAET1L	Q5VY80	246 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	TMEM42	Q69YG0	159 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	TXNRD3NB	Q6F5E7	133 aa		4.63	□□□□□ -1.67
SNHG1-218	ENST00000541615	UNQ6126/PRO20091	Q6UXV3	157 aa		4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms