RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 STEAP1Q9UHE8 339 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 PIGLQ9Y2B2 252 aa23.98■■□□□ 1.43
CCM2-218ENST00000541586 XRCC2O43543 280 aa23.97■■□□□ 1.43
CCM2-218ENST00000541586 PPP3CBP16298 524 aa23.97■■□□□ 1.43
CCM2-218ENST00000541586 FAHP16930 419 aa23.97■■□□□ 1.43
CCM2-218ENST00000541586 SP5Q6BEB4 398 aaPredicted RBP23.97■■□□□ 1.43
CCM2-218ENST00000541586 LRRC28Q86X40 367 aaPredicted RBP23.97■■□□□ 1.43
CCM2-218ENST00000541586 PAQR4Q8N4S7 273 aaPredicted RBP23.97■■□□□ 1.43
CCM2-218ENST00000541586 NKAIN3Q8N8D7 197 aa23.97■■□□□ 1.43
CCM2-218ENST00000541586 NKX3-1Q99801 234 aaPredicted RBP23.97■■□□□ 1.43
CCM2-218ENST00000541586 TMEM138Q9NPI0 162 aa23.97■■□□□ 1.43
CCM2-218ENST00000541586 ICE1Q9Y2F5 2266 aa23.97■■□□□ 1.43
CCM2-218ENST00000541586 DOPEY2Q9Y3R5 2298 aa23.97■■□□□ 1.43
CCM2-218ENST00000541586 FABP12A6NFH5 140 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 FAM25AB3EWG3 89 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 FAM25CB3EWG5 89 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 FAM25GB3EWG6 89 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 SULT1B1O43704 296 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 EIF4EP06730 217 aaKnown RBP23.96■■□□□ 1.43
CCM2-218ENST00000541586 CELA3BP08861 270 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 MYPOPQ86VE0 399 aaPredicted RBP23.96■■□□□ 1.43
CCM2-218ENST00000541586 DMRTC2Q8IXT2 367 aaPredicted RBP23.96■■□□□ 1.43
CCM2-218ENST00000541586 SPSB4Q96A44 273 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 APOBEC3DQ96AK3 386 aaPredicted RBP23.96■■□□□ 1.43
CCM2-218ENST00000541586 C10orf35Q96D05 121 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 CRIM1Q9NZV1 1036 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 CGGBP1Q9UFW8 167 aaPredicted RBP23.96■■□□□ 1.43
CCM2-218ENST00000541586 SLC25A15Q9Y619 301 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 UTP20O75691 2785 aaKnown RBP23.96■■□□□ 1.43
CCM2-218ENST00000541586 DHRS7CA6NNS2 312 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 SLC17A2O00624 439 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 THBDP07204 575 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 CALCBP10092 127 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 ACKR3P25106 362 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 COL8A1P27658 744 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 THBS4P35443 961 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 FAM166AQ6J272 317 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 FAM131AQ6UXB0 335 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 SEMA6DQ8NFY4 1073 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 AKAP1Q92667 903 aaKnown RBP eCLIP23.96■■□□□ 1.43
CCM2-218ENST00000541586 PSMG3-AS1Q96PY0 264 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 MRI1Q9BV20 369 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 PALMDQ9NP74 551 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 OR5V1Q9UGF6 321 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 AMDHD2Q9Y303 409 aa23.96■■□□□ 1.43
CCM2-218ENST00000541586 hCG_38984A0A1B0GV85 526 aa23.95■■□□□ 1.42
CCM2-218ENST00000541586 CBR1P16152 277 aa23.95■■□□□ 1.42
CCM2-218ENST00000541586 WNT5AP41221 380 aa23.95■■□□□ 1.42
CCM2-218ENST00000541586 IDH3GP51553 393 aaPredicted RBP23.95■■□□□ 1.42
CCM2-218ENST00000541586 PRSS12P56730 875 aa23.95■■□□□ 1.42
CCM2-218ENST00000541586 FAM3AP98173 230 aa23.95■■□□□ 1.42
CCM2-218ENST00000541586 TNK1Q13470 666 aa23.95■■□□□ 1.42
CCM2-218ENST00000541586 ZNF79Q15937 498 aa23.95■■□□□ 1.42
CCM2-218ENST00000541586 LYPD6Q86Y78 171 aa23.95■■□□□ 1.42
CCM2-218ENST00000541586 SNX29P2Q8IUI4 249 aa23.95■■□□□ 1.42
CCM2-218ENST00000541586 OR5AS1Q8N127 324 aa23.95■■□□□ 1.42
CCM2-218ENST00000541586 JAGN1Q8N5M9 183 aa23.95■■□□□ 1.42
CCM2-218ENST00000541586 OR52N4Q8NGI2 321 aa23.95■■□□□ 1.42
CCM2-218ENST00000541586 CYSLTR2Q9NS75 346 aa23.95■■□□□ 1.42
CCM2-218ENST00000541586 NGFP01138 241 aa23.94■■□□□ 1.42
CCM2-218ENST00000541586 GSK3AP49840 483 aa23.94■■□□□ 1.42
CCM2-218ENST00000541586 RAB11BQ15907 218 aa23.94■■□□□ 1.42
CCM2-218ENST00000541586 TBC1D28Q2M2D7 210 aa23.94■■□□□ 1.42
CCM2-218ENST00000541586 PP6455Q8WZ26 134 aa23.94■■□□□ 1.42
CCM2-218ENST00000541586 SOSTQ9BQB4 213 aa23.94■■□□□ 1.42
CCM2-218ENST00000541586 IGFBP2P18065 325 aa23.93■■□□□ 1.42
CCM2-218ENST00000541586 MAP2K3P46734 347 aa23.93■■□□□ 1.42
CCM2-218ENST00000541586 ZNF83P51522 516 aa23.93■■□□□ 1.42
CCM2-218ENST00000541586 RIPPLY1Q0D2K3 151 aa23.93■■□□□ 1.42
CCM2-218ENST00000541586 MADCAM1Q13477 382 aa23.93■■□□□ 1.42
CCM2-218ENST00000541586 P2RY14Q15391 338 aa23.93■■□□□ 1.42
CCM2-218ENST00000541586 ZNF101Q8IZC7 436 aa23.93■■□□□ 1.42
CCM2-218ENST00000541586 FOXRED1Q96CU9 486 aaPredicted RBP23.93■■□□□ 1.42
CCM2-218ENST00000541586 SDHCQ99643 169 aaPredicted RBP23.93■■□□□ 1.42
CCM2-218ENST00000541586 CHST5Q9GZS9 411 aa23.93■■□□□ 1.42
CCM2-218ENST00000541586 OBP2BQ9NPH6 170 aa23.93■■□□□ 1.42
CCM2-218ENST00000541586 EXTL2Q9UBQ6 330 aa23.93■■□□□ 1.42
CCM2-218ENST00000541586 STARD10Q9Y365 291 aa23.93■■□□□ 1.42
CCM2-218ENST00000541586 IGKV3-15P01624 115 aa23.93■■□□□ 1.42
CCM2-218ENST00000541586 APOA1P02647 267 aa23.93■■□□□ 1.42
CCM2-218ENST00000541586 ERCC1P07992 297 aaPredicted RBP23.93■■□□□ 1.42
CCM2-218ENST00000541586 IGKV1-9A0A0C4DH69 117 aa23.92■■□□□ 1.42
CCM2-218ENST00000541586 HTR2CP28335 458 aa23.92■■□□□ 1.42
CCM2-218ENST00000541586 MALLQ13021 153 aa23.92■■□□□ 1.42
CCM2-218ENST00000541586 OR8B8Q15620 311 aa23.92■■□□□ 1.42
CCM2-218ENST00000541586 UBE2NLQ5JXB2 153 aa23.92■■□□□ 1.42
CCM2-218ENST00000541586 C1orf100Q5SVJ3 147 aa23.92■■□□□ 1.42
CCM2-218ENST00000541586 METAP1DQ6UB28 335 aaPredicted RBP23.92■■□□□ 1.42
CCM2-218ENST00000541586 UTS2BQ765I0 119 aa23.92■■□□□ 1.42
CCM2-218ENST00000541586 OR6M1Q8NGM8 313 aa23.92■■□□□ 1.42
CCM2-218ENST00000541586 SLC25A28Q96A46 364 aa23.92■■□□□ 1.42
CCM2-218ENST00000541586 CMTM3Q96MX0 182 aa23.92■■□□□ 1.42
CCM2-218ENST00000541586 RHBDD3Q9Y3P4 386 aa23.92■■□□□ 1.42
CCM2-218ENST00000541586 M0R1B8 84 aa23.91■■□□□ 1.42
CCM2-218ENST00000541586 IFITM3Q01628 133 aa23.91■■□□□ 1.42
CCM2-218ENST00000541586 GK2Q14410 553 aaPredicted RBP23.91■■□□□ 1.42
CCM2-218ENST00000541586 UBE2V2Q15819 145 aa23.91■■□□□ 1.42
CCM2-218ENST00000541586 OR4M1Q8NGD0 313 aa23.91■■□□□ 1.42
CCM2-218ENST00000541586 OR51D1Q8NGF3 324 aa23.91■■□□□ 1.42
CCM2-218ENST00000541586 SORCS2Q96PQ0 1159 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms