RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 HILPDAQ9Y5L2 63 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 SERPINE3A8MV23 424 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 ODF3BA8MYP8 253 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 CCRL2O00421 344 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 TPST1O60507 370 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 PTP4A3O75365 173 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 DNAJC8O75937 253 aaPredicted RBP7.45□□□□□ -1.22
YBX3-211ENST00000541351 TSPAN19P0C672 248 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 IGHV1-8P0DP01 117 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 SELLP14151 372 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 CTLA4P16410 223 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 CD247P20963 164 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 CALRP27797 417 aaKnown RBP7.45□□□□□ -1.22
YBX3-211ENST00000541351 CDX1P47902 265 aaPredicted RBP7.45□□□□□ -1.22
YBX3-211ENST00000541351 CDK6Q00534 326 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 MPP2Q14168 576 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 C6orf10Q5SRN2 563 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 GCNT6Q5T4J0 391 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 C16orf89Q6UX73 402 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 CBLL1Q75N03 491 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 FTMTQ8N4E7 242 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 DRAM1Q8N682 238 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 OR1M1Q8NGA1 313 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 ANGPTL6Q8NI99 470 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 C1orf21Q9H246 121 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 PAPOLBQ9NRJ5 636 aaKnown RBP7.45□□□□□ -1.22
YBX3-211ENST00000541351 GRHPRQ9UBQ7 328 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 RPS6KA6Q9UK32 745 aa7.45□□□□□ -1.22
YBX3-211ENST00000541351 ANXA2P2A6NMY6 339 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 OR2AT4A6NND4 320 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.44□□□□□ -1.22
YBX3-211ENST00000541351 CLIC1O00299 241 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 TPST2O60704 377 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 SAP30O75446 220 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 KHDRBS3O75525 346 aaKnown RBP7.44□□□□□ -1.22
YBX3-211ENST00000541351 ACSM4P0C7M7 580 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 PPIBP23284 216 aaKnown RBP7.44□□□□□ -1.22
YBX3-211ENST00000541351 GCAP28676 217 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 SLC7A2P52569 658 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 SRSF7Q16629 238 aaKnown RBP eCLIP7.44□□□□□ -1.22
YBX3-211ENST00000541351 NANOGP8Q6NSW7 305 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 ZNF782Q6ZMW2 699 aaPredicted RBP7.44□□□□□ -1.22
YBX3-211ENST00000541351 CFAP77Q6ZQR2 320 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 C18orf65Q6ZTR6 163 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 TRMT10CQ7L0Y3 403 aaKnown RBP7.44□□□□□ -1.22
YBX3-211ENST00000541351 FAM71E2Q8N5Q1 922 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 MOSPD2Q8NHP6 518 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 NFKBIDQ8NI38 313 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 SPTSSAQ969W0 71 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 PITX2Q99697 317 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 MICU1Q9BPX6 476 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 CCDC134Q9H6E4 229 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 ISYNA1Q9NPH2 558 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 SNTG1Q9NSN8 517 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 NLKQ9UBE8 527 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 CORO2BQ9UQ03 480 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 MED31Q9Y3C7 131 aa7.44□□□□□ -1.22
YBX3-211ENST00000541351 A0A1W2PPM1 405 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 TRIM64CA6NLI5 447 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 SLC1A7O00341 560 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 CDIPTO14735 213 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 PSPNO60542 156 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 SCG5P05408 212 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 ALDOCP09972 364 aaKnown RBP7.43□□□□□ -1.22
YBX3-211ENST00000541351 NUDT7P0C024 238 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 SPNP16150 400 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 KRT4P19013 534 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 AMY2BP19961 511 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 ALDH3A1P30838 453 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 NME5P56597 212 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 UFM1P61960 85 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 LAPTM4AQ15012 233 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 HSP90B2PQ58FF3 399 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 LRIF1Q5T3J3 769 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 RNLSQ5VYX0 342 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 LCN8Q6JVE9 175 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 OGFOD2Q6N063 350 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 DNM1P34Q6PK57 102 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 LINC00336Q6ZUF6 198 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 TMPRSS11FQ6ZWK6 438 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 TSEN54Q7Z6J9 526 aaKnown RBP7.43□□□□□ -1.22
YBX3-211ENST00000541351 RPP25LQ8N5L8 163 aaKnown RBP7.43□□□□□ -1.22
YBX3-211ENST00000541351 OR4C15Q8NGM1 316 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 BCAS4Q8TDM0 211 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 C4orf3Q8WVX3 66 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 CREB3L1Q96BA8 519 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 PPP1R36Q96LQ0 422 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 PPCSQ9HAB8 311 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 ABCB9Q9NP78 766 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 MEPEQ9NQ76 525 aaPredicted RBP7.43□□□□□ -1.22
YBX3-211ENST00000541351 C19orf12Q9NSK7 152 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 C19orf73Q9NVV2 129 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 RAB21Q9UL25 225 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 KLK5Q9Y337 293 aaPredicted RBP7.43□□□□□ -1.22
YBX3-211ENST00000541351 MOB4Q9Y3A3 225 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 HSPE1-MOB4S4R3N1 261 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 HECTD4Q9Y4D8 3996 aa7.43□□□□□ -1.22
YBX3-211ENST00000541351 KIAA1109Q2LD37 5005 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 PRSS37A4D1T9 235 aa7.42□□□□□ -1.22
YBX3-211ENST00000541351 TMEM210A6NLX4 147 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms