RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 OR5D14Q8NGL3 314 aa9.24□□□□□ -0.93
CHFR-219ENST00000541341 CPT1CQ8TCG5 803 aa9.24□□□□□ -0.93
CHFR-219ENST00000541341 ADAMTS17Q8TE56 1095 aa9.24□□□□□ -0.93
CHFR-219ENST00000541341 METTL21AQ8WXB1 218 aa9.24□□□□□ -0.93
CHFR-219ENST00000541341 SLC25A28Q96A46 364 aa9.24□□□□□ -0.93
CHFR-219ENST00000541341 ZNF501Q96CX3 271 aaPredicted RBP9.24□□□□□ -0.93
CHFR-219ENST00000541341 RASD2Q96D21 266 aa9.24□□□□□ -0.93
CHFR-219ENST00000541341 SLC25A44Q96H78 314 aaPredicted RBP9.24□□□□□ -0.93
CHFR-219ENST00000541341 VSTM2LQ96N03 204 aa9.24□□□□□ -0.93
CHFR-219ENST00000541341 URM1Q9BTM9 101 aaKnown RBP9.24□□□□□ -0.93
CHFR-219ENST00000541341 TMPRSS5Q9H3S3 457 aa9.24□□□□□ -0.93
CHFR-219ENST00000541341 SRA1Q9HD15 236 aaKnown RBP9.24□□□□□ -0.93
CHFR-219ENST00000541341 VSX1Q9NZR4 365 aaPredicted RBP9.24□□□□□ -0.93
CHFR-219ENST00000541341 PADI1Q9ULC6 663 aa9.24□□□□□ -0.93
CHFR-219ENST00000541341 SLC5A6Q9Y289 635 aa9.24□□□□□ -0.93
CHFR-219ENST00000541341 ADAM18Q9Y3Q7 739 aa9.24□□□□□ -0.93
CHFR-219ENST00000541341 CSAG2Q9Y5P2 127 aa9.24□□□□□ -0.93
CHFR-219ENST00000541341 R4GMQ9 66 aa9.24□□□□□ -0.93
CHFR-219ENST00000541341 SCN3AQ9NY46 2000 aa9.24□□□□□ -0.93
CHFR-219ENST00000541341 A0A1B0GW64 132 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 A0A1W2PQD3 144 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 FITM1A5D6W6 292 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 BTBD17A6NE02 478 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 C5orf52A6NGY3 159 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 H0YGG7 62 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 GPR31O00270 319 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 HCRTR1O43613 425 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 SFT2D2O95562 160 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 NTN1O95631 604 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 F10P00742 488 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 HLA-DQA2P01906 255 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 CRYBA1P05813 215 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 NGFRP08138 427 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 HKR1P10072 659 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 FGF5P12034 268 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 VAMP1P23763 118 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 FPR2P25090 351 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 ABCD3P28288 659 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 AQP2P41181 271 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 EMDP50402 254 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 SUCLG1P53597 346 aaKnown RBP9.23□□□□□ -0.93
CHFR-219ENST00000541341 ATP1B3P54709 279 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 RAB2AP61019 212 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 ARF3P61204 181 aaPredicted RBP9.23□□□□□ -0.93
CHFR-219ENST00000541341 RPL27P61353 136 aaKnown RBP9.23□□□□□ -0.93
CHFR-219ENST00000541341 POLR2GP62487 172 aaKnown RBP eCLIP9.23□□□□□ -0.93
CHFR-219ENST00000541341 ACY1Q03154 408 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 MRPL49Q13405 166 aaKnown RBP9.23□□□□□ -0.93
CHFR-219ENST00000541341 GRM7Q14831 915 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 SGCBQ16585 318 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 C2orf68Q2NKX9 166 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 WDR38Q5JTN6 314 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 LCN10Q6JVE6 187 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 ZNF585AQ6P3V2 769 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 KLHL24Q6TFL4 600 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 DPY19L4Q7Z388 723 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 TRAPPC6BQ86SZ2 158 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 HOGA1Q86XE5 327 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 CATSPERDQ86XM0 798 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.23□□□□□ -0.93
CHFR-219ENST00000541341 CSNK1A1LQ8N752 337 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 ZNF511Q8NB15 262 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 OR1J1Q8NGS3 322 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 OR13C3Q8NGS6 347 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 KCNG3Q8TAE7 436 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 ZCCHC10Q8TBK6 192 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 ASB5Q8WWX0 329 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 GCDHQ92947 438 aaPredicted RBP9.23□□□□□ -0.93
CHFR-219ENST00000541341 EMG1Q92979 244 aaKnown RBP9.23□□□□□ -0.93
CHFR-219ENST00000541341 MR1Q95460 341 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 SULT4A1Q9BR01 284 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 SOHLH2Q9NX45 425 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 RARRES3Q9UL19 164 aa9.23□□□□□ -0.93
CHFR-219ENST00000541341 FARSAQ9Y285 508 aaKnown RBP9.23□□□□□ -0.93
CHFR-219ENST00000541341 USP9XQ93008 2570 aaPredicted RBP9.22□□□□□ -0.93
CHFR-219ENST00000541341 LRRK2Q5S007 2527 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 PRSS37A4D1T9 235 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 ZNF860A6NHJ4 632 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 SSX5O60225 188 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 IL33O95760 270 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 CD5P06127 495 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 SPP1P10451 314 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 NAT2P11245 290 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 NR2C1P13056 603 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 PGAM2P15259 253 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 ZNF14P17017 642 aaPredicted RBP9.22□□□□□ -0.93
CHFR-219ENST00000541341 ARL4DP49703 201 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 MMP16P51512 607 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 PGDP52209 483 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 FUT7Q11130 342 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 PLA2G7Q13093 441 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 PPP1R1AQ13522 171 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 FAM53BQ14153 422 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 IL11RAQ14626 422 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 EXOSC7Q15024 291 aaKnown RBP9.22□□□□□ -0.93
CHFR-219ENST00000541341 SGCAQ16586 387 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 MEP1BQ16820 701 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 PRTGQ2VWP7 1150 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 ZNF260Q3ZCT1 412 aa9.22□□□□□ -0.93
CHFR-219ENST00000541341 LBHQ53QV2 105 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms