RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 UNQ6126/PRO20091Q6UXV3 157 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 SLC16A12Q6ZSM3 486 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 CEACAM19Q7Z692 300 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 MS4A15Q8N5U1 240 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 BHLHE23Q8NDY6 225 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 OR56B2PQ8NGI1 322 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 OR13C3Q8NGS6 347 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 SYNPRQ8TBG9 265 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 GPR148Q8TDV2 347 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 GTF3AQ92664 365 aaKnown RBP7.99□□□□□ -1.13
DDX55-208ENST00000541259 ADAT3Q96EY9 351 aaPredicted RBP7.99□□□□□ -1.13
DDX55-208ENST00000541259 CHCHD6Q9BRQ6 235 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 ZNF275Q9NSD4 429 aaPredicted RBP7.99□□□□□ -1.13
DDX55-208ENST00000541259 CISD1Q9NZ45 108 aaKnown RBP7.99□□□□□ -1.13
DDX55-208ENST00000541259 DUSP13Q9UII6 198 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 ZNF391Q9UJN7 358 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 PURGQ9UJV8 347 aaKnown RBP7.99□□□□□ -1.13
DDX55-208ENST00000541259 STUB1Q9UNE7 303 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 DHDHQ9UQ10 334 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 CMAHPQ9Y471 501 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 CENPEQ02224 2701 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 TRBV5-7A0A0A0MS05 114 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 LOC100506127A0A0U1RQW1 187 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 TRDV1A0A1B0GX56 115 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 LOC390937A0A1W2PQ73 354 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 DPPA5A6NC42 116 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 ADARB2-AS1A8MUL3 147 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 IQCF6A8MYZ5 107 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 EREGO14944 169 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 CTAG2O75638 210 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 IGHV3-13P01766 116 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 HLA-DPB1P04440 258 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 KITLGP21583 273 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 TUBG1P23258 451 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 PSMA1P25786 263 aaKnown RBP7.98□□□□□ -1.13
DDX55-208ENST00000541259 RPS23P62266 143 aaKnown RBP7.98□□□□□ -1.13
DDX55-208ENST00000541259 RIPPLY1Q0D2K3 151 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 TRAM1Q15629 374 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 Q499Y3 187 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 ZMAT1Q5H9K5 638 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 C22orf42Q6IC83 251 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 CLVS1Q8IUQ0 354 aaPredicted RBP7.98□□□□□ -1.13
DDX55-208ENST00000541259 C1orf174Q8IYL3 243 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 SEMA6DQ8NFY4 1073 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 EDARADDQ8WWZ3 215 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 DVL3Q92997 716 aaPredicted RBP7.98□□□□□ -1.13
DDX55-208ENST00000541259 MRPL24Q96A35 216 aaKnown RBP7.98□□□□□ -1.13
DDX55-208ENST00000541259 DERL3Q96Q80 235 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 DHRS9Q9BPW9 319 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 CENPOQ9BU64 300 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 ZNF442Q9H7R0 627 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 EXOSC4Q9NPD3 245 aaKnown RBP7.98□□□□□ -1.13
DDX55-208ENST00000541259 NOX4Q9NPH5 578 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 TUBG2Q9NRH3 451 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 TXNL4BQ9NX01 149 aaKnown RBP7.98□□□□□ -1.13
DDX55-208ENST00000541259 TAAR3PQ9P1P4 343 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 PLEKHB1Q9UF11 243 aaPredicted RBP7.98□□□□□ -1.13
DDX55-208ENST00000541259 GPR160Q9UJ42 338 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 RHBDD3Q9Y3P4 386 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 CEPT1Q9Y6K0 416 aa7.98□□□□□ -1.13
DDX55-208ENST00000541259 IGLV3-9A0A075B6K5 115 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 TRAV8-7A0A075B6U6 113 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 SHISA3A0PJX4 238 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 ZNF850A8MQ14 1090 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 H0YL77 283 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 AIREO43918 545 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 TIMM8AO60220 97 aaPredicted RBP7.97□□□□□ -1.13
DDX55-208ENST00000541259 MTRF1O75570 445 aaKnown RBP7.97□□□□□ -1.13
DDX55-208ENST00000541259 GATBO75879 557 aaKnown RBP7.97□□□□□ -1.13
DDX55-208ENST00000541259 SERPINA3P01011 423 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 UCHL1P09936 223 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 ZNF20P17024 532 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 CFL1P23528 166 aaKnown RBP7.97□□□□□ -1.13
DDX55-208ENST00000541259 APOBEC3AP31941 199 aaPredicted RBP7.97□□□□□ -1.13
DDX55-208ENST00000541259 SERPINF1P36955 418 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 GNALP38405 381 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 KLF3P57682 345 aaPredicted RBP7.97□□□□□ -1.13
DDX55-208ENST00000541259 MST1LQ2TV78 715 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 Q6ZR03 302 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 RNF144BQ7Z419 303 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 ANKRD13BQ86YJ7 626 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 PARP16Q8N5Y8 322 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 PIGCQ92535 297 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 TMEM106AQ96A25 262 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 PLK3Q9H4B4 646 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 OPA3Q9H6K4 179 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 MSL2Q9HCI7 577 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 GPR173Q9NS66 373 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 TAS2R4Q9NYW5 299 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 ENPP5Q9UJA9 477 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 SSR3Q9UNL2 185 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 DYSFO75923 2080 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 USF3Q68DE3 2245 aa7.97□□□□□ -1.13
DDX55-208ENST00000541259 CELSR2Q9HCU4 2923 aa7.96□□□□□ -1.13
DDX55-208ENST00000541259 SPG11Q96JI7 2443 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 ZNF816-ZNF321PA0A0X1KG74 233 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 A0A1W2PPW3 197 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 DHRS7CA6NNS2 312 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 HS3ST1O14792 307 aa7.96□□□□□ -1.14
DDX55-208ENST00000541259 GMDSO60547 372 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms