RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 COMMD4Q9H0A8 199 aa15.93■□□□□ 0.14
VPS33A-205ENST00000541169 PPP1R3CQ9UQK1 317 aa15.93■□□□□ 0.14
VPS33A-205ENST00000541169 ERGIC3Q9Y282 383 aa15.93■□□□□ 0.14
VPS33A-205ENST00000541169 CHD3Q12873 2000 aaKnown RBP15.92■□□□□ 0.14
VPS33A-205ENST00000541169 SYT7O43581 403 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 XPNPEP2O43895 674 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 NCR1O76036 304 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 PTBP3O95758 552 aaKnown RBP15.92■□□□□ 0.14
VPS33A-205ENST00000541169 ETV1P50549 477 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 CDH15P55291 814 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 TNK1Q13470 666 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 RIN1Q13671 783 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 ALKBH1Q13686 389 aaKnown RBP15.92■□□□□ 0.14
VPS33A-205ENST00000541169 WDR38Q5JTN6 314 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 RPL22L1Q6P5R6 122 aaKnown RBP15.92■□□□□ 0.14
VPS33A-205ENST00000541169 AHSA2Q719I0 299 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 C1orf87Q8N0U7 546 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 GTF3AQ92664 365 aaKnown RBP15.92■□□□□ 0.14
VPS33A-205ENST00000541169 MEGF10Q96KG7 1140 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 CNBD2Q96M20 576 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 CDCA4Q9BXL8 241 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 TRIM36Q9NQ86 728 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 BABAM2Q9NXR7 383 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 FRRS1LQ9P0K9 344 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 V9GYS6 101 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 OTOGQ6ZRI0 2925 aa15.92■□□□□ 0.14
VPS33A-205ENST00000541169 VWC2LB2RUY7 222 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 CLDN25C9JDP6 229 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 MYL12BO14950 172 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 MLNRO43193 412 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 RP2O75695 350 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 LY6HO94772 140 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 FSTL3O95633 263 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 NR4A2P43354 598 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 CARTPTQ16568 116 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 OR10AD1Q8NGE0 317 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 RAB1CQ92928 201 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 FAM71F1Q96KD3 344 aaPredicted RBP15.91■□□□□ 0.14
VPS33A-205ENST00000541169 MICU1Q9BPX6 476 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 RTL8AQ9BWD3 113 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 YTHDF1Q9BYJ9 559 aaKnown RBP15.91■□□□□ 0.14
VPS33A-205ENST00000541169 REG4Q9BYZ8 158 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 PLEKHA1Q9HB21 404 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 HHLA2Q9UM44 414 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 PIGLQ9Y2B2 252 aa15.91■□□□□ 0.14
VPS33A-205ENST00000541169 A0A1B0GTI1 187 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 TMEM210A6NLX4 147 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 PTGES3LE9PB15 166 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 F5H5P2 479 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 MRPS14O60783 128 aaKnown RBP15.9■□□□□ 0.14
VPS33A-205ENST00000541169 LILRA1O75019 489 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 SERPINA3P01011 423 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 HLA-DPB1P04440 258 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 CDK1P06493 297 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 HEXAP06865 529 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 CD99P14209 185 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 ANOS1P23352 680 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 ACKR3P25106 362 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 SLC35A2P78381 396 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 PRSS35Q8N3Z0 413 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 ZNF676Q8N7Q3 588 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 OR11L1Q8NGX0 322 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 OR5AK2Q8NH90 309 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 Q8TCH9 128 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 ITLN1Q8WWA0 313 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 PP6455Q8WZ26 134 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 CCL17Q92583 94 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 MND1Q9BWT6 205 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 DUSP21Q9H596 190 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 ISG20L2Q9H9L3 353 aaKnown RBP15.9■□□□□ 0.14
VPS33A-205ENST00000541169 FN3KRPQ9HA64 309 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 GCM1Q9NP62 436 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 ZNF275Q9NSD4 429 aaPredicted RBP15.9■□□□□ 0.14
VPS33A-205ENST00000541169 RHBDD3Q9Y3P4 386 aa15.9■□□□□ 0.14
VPS33A-205ENST00000541169 TRBV2A0A0J9YWF9 115 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 H0YL77 283 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 P2RY10O00398 339 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 IRF2P14316 349 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 USF1P22415 310 aaPredicted RBP15.89■□□□□ 0.13
VPS33A-205ENST00000541169 CPT2P23786 658 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 CRHBPP24387 322 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 COL8A2P25067 703 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 PSMB10P40306 273 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 GPR6P46095 362 aaPredicted RBP15.89■□□□□ 0.13
VPS33A-205ENST00000541169 BDH1Q02338 343 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 LOXL1Q08397 574 aaPredicted RBP15.89■□□□□ 0.13
VPS33A-205ENST00000541169 PRDX4Q13162 271 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 CEACAM21Q3KPI0 293 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 CLVS2Q5SYC1 327 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 ZDHHC23Q8IYP9 409 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 RNF166Q96A37 237 aaPredicted RBP15.89■□□□□ 0.13
VPS33A-205ENST00000541169 C18orf12Q96KH6 178 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 TMUB1Q9BVT8 246 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 TMEM106BQ9NUM4 274 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 TANC2Q9HCD6 1990 aa15.89■□□□□ 0.13
VPS33A-205ENST00000541169 IGHV4-30-2A0A087WSY4 118 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 LOC107986453A0A1B0GWG9 222 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 OR5B21A6NL26 309 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 OR4C45A6NMZ5 311 aa15.88■□□□□ 0.13
VPS33A-205ENST00000541169 RGS10O43665 173 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms