RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 CGAP01215 116 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 FCER2P06734 321 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 TPOP07202 933 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 PITPNAQ00169 270 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 GABRA6Q16445 453 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 LINC00303Q3SY05 128 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 GLIPR1L1Q6UWM5 242 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 DNM1P46Q6ZS02 220 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 KRT74Q7RTS7 529 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 CD163Q86VB7 1156 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 ZNF101Q8IZC7 436 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 ACBD4Q8NC06 268 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 SEMA6DQ8NFY4 1073 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 SPSB4Q96A44 273 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 UPRTQ96BW1 309 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 FOXRED1Q96CU9 486 aaPredicted RBP10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 STARD4Q96DR4 205 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 UQCC2Q9BRT2 126 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 NICN1Q9BSH3 213 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 ZMAT3Q9HA38 289 aaKnown RBP10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 RBFOX1Q9NWB1 397 aaKnown RBP10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 MRPS28Q9Y2Q9 187 aaKnown RBP10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 STARD10Q9Y365 291 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 RBMX2Q9Y388 322 aaKnown RBP10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 CACNG2Q9Y698 323 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 PIEZO2Q9H5I5 2752 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 MBD3L4A6NDZ8 208 aaPredicted RBP10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 MBD3L3A6NE82 208 aaPredicted RBP10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 MBD3L5A6NJ08 208 aaPredicted RBP10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 TMEM14DPA8MWL7 114 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 BOLA2-SMG1P6H3BVE0 249 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 GABARAPH6UMI1 98 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 MT-ND4P03905 459 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 COX5BP10606 129 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 INPP1P49441 399 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 TDGF1P3P51864 188 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 HLXQ14774 488 aaPredicted RBP10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 GSG1Q2KHT4 349 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 AWAT2Q6E213 333 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 TMEM53Q6P2H8 277 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 UTS2BQ765I0 119 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 CISD2Q8N5K1 135 aaKnown RBP10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 ZNF610Q8N9Z0 462 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 MBD3L2Q8NHZ7 208 aaPredicted RBP10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 UBASH3BQ8TF42 649 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 FGF23Q9GZV9 251 aaPredicted RBP10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 OR51B6Q9H340 312 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 ATPIF1Q9UII2 106 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 RAB27BO00194 218 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 GMDSO60547 372 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 BPNT1O95861 308 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 ALDOBP05062 364 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 ARR3P36575 388 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 CXADRP78310 365 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 GK2Q14410 553 aaPredicted RBP10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 OR8B8Q15620 311 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 KISS1Q15726 138 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 IGFBP7Q16270 282 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 PLA1AQ53H76 456 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 TMEM42Q69YG0 159 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 FAAP20Q6NZ36 180 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 Q6ZT83 130 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 RFPL4BQ6ZWI9 263 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 GABRG1Q8N1C3 465 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 TOMM5Q8N4H5 51 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 WDR31Q8NA23 367 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 OR10K1Q8NGX5 313 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 OR6K3Q8NGY3 331 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 PP6455Q8WZ26 134 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 ZC3HAV1LQ96H79 300 aaKnown RBP10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 BANF2Q9H503 90 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 PTTG3PQ9NZH4 202 aa10.61□□□□□ -0.71
AP003559.1-201ENST00000540906 TPRP12270 2363 aaKnown RBP10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 LILRA1O75019 489 aa10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 MTRF1O75570 445 aaKnown RBP10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 AGFG2O95081 481 aa10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 CRYABP02511 175 aaKnown RBP10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 ERCC1P07992 297 aaPredicted RBP10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 ZNF14P17017 642 aaPredicted RBP10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 COX5AP20674 150 aa10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 SLC6A1P30531 599 aa10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 RIPPLY1Q0D2K3 151 aa10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 C11orf91Q3C1V1 193 aa10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 NCCRP1Q6ZVX7 275 aaPredicted RBP10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 DUSP18Q8NEJ0 188 aa10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 ENKURQ8TC29 256 aa10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 C1QTNF6Q9BXI9 259 aa10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 LPAR5Q9H1C0 372 aa10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 PLSCR4Q9NRQ2 329 aa10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 GPR160Q9UJ42 338 aa10.6□□□□□ -0.71
AP003559.1-201ENST00000540906 RAB6AP20340 208 aa10.59□□□□□ -0.71
AP003559.1-201ENST00000540906 CCR6P51684 374 aa10.59□□□□□ -0.71
AP003559.1-201ENST00000540906 TMPRSS3P57727 454 aa10.59□□□□□ -0.71
AP003559.1-201ENST00000540906 ZP1P60852 638 aa10.59□□□□□ -0.71
AP003559.1-201ENST00000540906 C1orf185Q5T7R7 199 aa10.59□□□□□ -0.71
AP003559.1-201ENST00000540906 OLFML2AQ68BL7 652 aa10.59□□□□□ -0.71
AP003559.1-201ENST00000540906 FAM180AQ6UWF9 173 aa10.59□□□□□ -0.71
AP003559.1-201ENST00000540906 CXorf67Q86X51 503 aaPredicted RBP10.59□□□□□ -0.71
AP003559.1-201ENST00000540906 OR56B2PQ8NGI1 322 aa10.59□□□□□ -0.71
AP003559.1-201ENST00000540906 DVL3Q92997 716 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms