RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 RGCCQ9H4X1 137 aa21.22■□□□□ 0.99
TTC3-225ENST00000540756 PLA2G10O15496 165 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 XRCC2O43543 280 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 CRHP06850 196 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 OCMP0CE72 109 aaPredicted RBP21.21■□□□□ 0.99
TTC3-225ENST00000540756 MAP2K3P46734 347 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 SCAND1P57086 179 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 RAB40AQ8WXH6 277 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 FAM46BQ96A09 425 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 UQCC2Q9BRT2 126 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 THAP7Q9BT49 309 aaPredicted RBP21.21■□□□□ 0.99
TTC3-225ENST00000540756 PTTG3PQ9NZH4 202 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 ZNF835Q9Y2P0 537 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 SMG1Q96Q15 3661 aaKnown RBP21.21■□□□□ 0.99
TTC3-225ENST00000540756 GMDSO60547 372 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 ERCC1P07992 297 aaPredicted RBP21.21■□□□□ 0.99
TTC3-225ENST00000540756 SCN1BQ07699 218 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 OR8B8Q15620 311 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 TMEM69Q5SWH9 247 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 RFPL4BQ6ZWI9 263 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 UTS2BQ765I0 119 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 APOBEC3DQ96AK3 386 aaPredicted RBP21.21■□□□□ 0.99
TTC3-225ENST00000540756 AUNIPQ9H7T9 357 aa21.21■□□□□ 0.99
TTC3-225ENST00000540756 CD3GP09693 182 aa21.2■□□□□ 0.98
TTC3-225ENST00000540756 HOXD11P31277 338 aaPredicted RBP21.2■□□□□ 0.98
TTC3-225ENST00000540756 UNC119Q13432 240 aa21.2■□□□□ 0.98
TTC3-225ENST00000540756 KISS1Q15726 138 aa21.2■□□□□ 0.98
TTC3-225ENST00000540756 TRIQKQ629K1 86 aa21.2■□□□□ 0.98
TTC3-225ENST00000540756 AKAP1Q92667 903 aaKnown RBP eCLIP21.2■□□□□ 0.98
TTC3-225ENST00000540756 TRIM63Q969Q1 353 aa21.2■□□□□ 0.98
TTC3-225ENST00000540756 REPIN1Q9BWE0 567 aaKnown RBP21.2■□□□□ 0.98
TTC3-225ENST00000540756 PRF1P14222 555 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 RFX2P48378 723 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 AWAT2Q6E213 333 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 C1QL2Q7Z5L3 287 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 C10orf35Q96D05 121 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 GPER1Q99527 375 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 ATG5Q9H1Y0 275 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 ZNF391Q9UJN7 358 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 A0A0G2JNJ9 132 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 DHRS7CA6NNS2 312 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 VSIG8P0DPA2 414 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 BMP5P22003 454 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 NR4A2P43354 598 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 QRFPP83859 136 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 SPATA46Q5T0L3 261 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 BEND4Q6ZU67 534 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 CCDC54Q8NEL0 328 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 C1orf162Q8NEQ5 155 aaPredicted RBP21.19■□□□□ 0.98
TTC3-225ENST00000540756 COX4I2Q96KJ9 171 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 C11orf54Q9H0W9 315 aaPredicted RBP21.19■□□□□ 0.98
TTC3-225ENST00000540756 Q9UFV3 132 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 PKD1L2Q7Z442 2459 aa21.19■□□□□ 0.98
TTC3-225ENST00000540756 ALDOBP05062 364 aa21.18■□□□□ 0.98
TTC3-225ENST00000540756 HOXD4P09016 255 aaPredicted RBP21.18■□□□□ 0.98
TTC3-225ENST00000540756 PLA2G5P39877 138 aa21.18■□□□□ 0.98
TTC3-225ENST00000540756 SRP9P49458 86 aaKnown RBP21.18■□□□□ 0.98
TTC3-225ENST00000540756 TAS2R20P59543 309 aa21.18■□□□□ 0.98
TTC3-225ENST00000540756 DEFA1P59665 94 aa21.18■□□□□ 0.98
TTC3-225ENST00000540756 DEFA3P59666 94 aa21.18■□□□□ 0.98
TTC3-225ENST00000540756 P2RY6Q15077 328 aa21.18■□□□□ 0.98
TTC3-225ENST00000540756 GLIPR1L1Q6UWM5 242 aa21.18■□□□□ 0.98
TTC3-225ENST00000540756 BHLHA15Q7RTS1 189 aaPredicted RBP21.18■□□□□ 0.98
TTC3-225ENST00000540756 NRARPQ7Z6K4 114 aa21.18■□□□□ 0.98
TTC3-225ENST00000540756 OR56B2PQ8NGI1 322 aa21.18■□□□□ 0.98
TTC3-225ENST00000540756 YIPF5Q969M3 257 aa21.18■□□□□ 0.98
TTC3-225ENST00000540756 ITFG2Q969R8 447 aa21.18■□□□□ 0.98
TTC3-225ENST00000540756 C1orf147Q96MC9 270 aaPredicted RBP21.18■□□□□ 0.98
TTC3-225ENST00000540756 NEDD4LQ96PU5 975 aa21.18■□□□□ 0.98
TTC3-225ENST00000540756 PRORYQ9H606 182 aa21.18■□□□□ 0.98
TTC3-225ENST00000540756 MRPS28Q9Y2Q9 187 aaKnown RBP21.18■□□□□ 0.98
TTC3-225ENST00000540756 NBASA2RRP1 2371 aa21.18■□□□□ 0.98
TTC3-225ENST00000540756 ADGRG4Q8IZF6 3080 aa21.18■□□□□ 0.98
TTC3-225ENST00000540756 A0A1W2PP11 408 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 MMP15P51511 669 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 MOGAT2Q3SYC2 334 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 TMEM42Q69YG0 159 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 CCDC36Q8IYA8 594 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 C19orf18Q8NEA5 215 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 BOD1Q96IK1 185 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 SFXN3Q9BWM7 321 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 IGKV1-27A0A075B6S5 117 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 NRASP01111 189 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 FAM157BP0CG42 384 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 HOXC12P31275 282 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 KLRB1Q12918 225 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 TBC1D28Q2M2D7 210 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 TMEM104Q8NE00 496 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 UBASH3BQ8TF42 649 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 PIGCQ92535 297 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 CCDC120Q96HB5 630 aa21.17■□□□□ 0.98
TTC3-225ENST00000540756 ZNF629Q9UEG4 869 aaPredicted RBP21.17■□□□□ 0.98
TTC3-225ENST00000540756 SHANK1Q9Y566 2161 aa21.16■□□□□ 0.98
TTC3-225ENST00000540756 FAM230AA0A1W2PPH8 454 aa21.16■□□□□ 0.98
TTC3-225ENST00000540756 MEIOCA2RUB1 952 aa21.16■□□□□ 0.98
TTC3-225ENST00000540756 XRCC3O43542 346 aa21.16■□□□□ 0.98
TTC3-225ENST00000540756 PITPNAQ00169 270 aa21.16■□□□□ 0.98
TTC3-225ENST00000540756 ASAH1Q13510 395 aa21.16■□□□□ 0.98
TTC3-225ENST00000540756 LY6DQ14210 128 aa21.16■□□□□ 0.98
TTC3-225ENST00000540756 EIF2S3LQ2VIR3 472 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms