RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 HCKP08631 526 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 PGA4P0DJD7 388 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 PGA3P0DJD8 388 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 PI3P19957 117 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 AMY2BP19961 511 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 CCL1P22362 96 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 GABREP78334 506 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 MYBPHQ13203 477 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 IL15RAQ13261 267 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 AADACL3Q5VUY0 350 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 FAM89BQ8N5H3 189 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 POC1AQ8NBT0 407 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 ADAMTS17Q8TE56 1095 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 SMIM8Q96KF7 97 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 MESP1Q9BRJ9 268 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 METTL8Q9H825 291 aaKnown RBP10.85□□□□□ -0.67
NPC1-202ENST00000540608 PRR13Q9NZ81 148 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 CA14Q9ULX7 337 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 OSGIN2Q9Y236 505 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 SPAG17Q6Q759 2223 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 A0A1W2PP11 408 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 PCP4L1A6NKN8 68 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 MBTPS2O43462 519 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 CRTAPO75718 401 aaPredicted RBP10.85□□□□□ -0.67
NPC1-202ENST00000540608 IGHG1P01857 330 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 SLC2A1P11166 492 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 RFC3P40938 356 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 RAB13P51153 203 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 NXPH1P58417 271 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 MFAP5Q13361 173 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 ARFRP1Q13795 201 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 SLC25A53Q5H9E4 307 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 NSUN5P2Q63ZY6 315 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 NFAM1Q8NET5 270 aaPredicted RBP10.85□□□□□ -0.67
NPC1-202ENST00000540608 NOXO1Q8NFA2 376 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 RHBDD1Q8TEB9 315 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 SSC4DQ8WTU2 575 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 THAP3Q8WTV1 239 aaPredicted RBP10.85□□□□□ -0.67
NPC1-202ENST00000540608 FAM71F1Q96KD3 344 aaPredicted RBP10.85□□□□□ -0.67
NPC1-202ENST00000540608 MRGPRX4Q96LA9 322 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 ZNF576Q9H609 170 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 TMEM231Q9H6L2 316 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 SEMA5BQ9P283 1151 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 CFAP54Q96N23 3096 aa10.85□□□□□ -0.67
NPC1-202ENST00000540608 F12P00748 615 aaPredicted RBP10.84□□□□□ -0.67
NPC1-202ENST00000540608 PET100P0DJ07 73 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 CDAP32320 146 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 OR3A2P47893 321 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 NPBWR1P48145 328 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 RAB32Q13637 225 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 COL19A1Q14993 1142 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 SLC25A47Q6Q0C1 308 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 DOK3Q7L591 496 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 ADPRHL1Q8NDY3 354 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 RNF138Q8WVD3 245 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 GPER1Q99527 375 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 ST6GALNAC5Q9BVH7 336 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 TGIF2Q9GZN2 237 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 OR10A2Q9H208 303 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 ACKR4Q9NPB9 350 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 PNRC2Q9NPJ4 139 aaKnown RBP10.84□□□□□ -0.67
NPC1-202ENST00000540608 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.84□□□□□ -0.67
NPC1-202ENST00000540608 SDHAF3Q9NRP4 125 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 SLC22A11Q9NSA0 550 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 ZFP57Q9NU63 452 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 WIF1Q9Y5W5 379 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 UNC13CQ8NB66 2214 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 ZNF98A6NK75 572 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 FIGNL2A6NMB9 653 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 TAAR5O14804 337 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 PIAS2O75928 621 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 HEXAP06865 529 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 SRFP11831 508 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 RPS2P15880 293 aaKnown RBP10.84□□□□□ -0.67
NPC1-202ENST00000540608 GLRA1P23415 457 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 CAV2P51636 162 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 ZNF41P51814 821 aaPredicted RBP10.84□□□□□ -0.67
NPC1-202ENST00000540608 TAS2R46P59540 309 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 EIF5AP63241 154 aaKnown RBP10.84□□□□□ -0.67
NPC1-202ENST00000540608 STT3BQ8TCJ2 826 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 ZNF501Q96CX3 271 aaPredicted RBP10.84□□□□□ -0.67
NPC1-202ENST00000540608 CYYR1Q96J86 154 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 HRH4Q9H3N8 390 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 RHOFQ9HBH0 211 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 OR2S2Q9NQN1 319 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 RCC2Q9P258 522 aaKnown RBP10.84□□□□□ -0.67
NPC1-202ENST00000540608 ASH2LQ9UBL3 628 aa10.84□□□□□ -0.67
NPC1-202ENST00000540608 TMEM265A0A087WTH1 108 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 IGKV1-9A0A0C4DH69 117 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 DUX1O43812 170 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 MSX1P28360 303 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 DHPSP49366 369 aaPredicted RBP10.83□□□□□ -0.68
NPC1-202ENST00000540608 P2RY4P51582 365 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 CTAG1AP78358 180 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 KCNMB1Q16558 191 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 GFOD2Q3B7J2 385 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 ZNF528Q3MIS6 628 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 EIF5AL1Q6IS14 154 aaKnown RBP10.83□□□□□ -0.68
NPC1-202ENST00000540608 ANKRD37Q7Z713 158 aa10.83□□□□□ -0.68
NPC1-202ENST00000540608 OR51T1Q8NGJ9 327 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms