RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 ECH1Q13011 328 aa17.72■□□□□ 0.43
PACSIN3-211ENST00000539589 RAB35Q15286 201 aa17.72■□□□□ 0.43
PACSIN3-211ENST00000539589 RIPPLY2Q5TAB7 128 aa17.72■□□□□ 0.43
PACSIN3-211ENST00000539589 OR2W3Q7Z3T1 314 aa17.72■□□□□ 0.43
PACSIN3-211ENST00000539589 SPACA3Q8IXA5 215 aa17.72■□□□□ 0.43
PACSIN3-211ENST00000539589 MEIOBQ8N635 442 aa17.72■□□□□ 0.43
PACSIN3-211ENST00000539589 NUDT16L1Q9BRJ7 211 aaKnown RBP17.72■□□□□ 0.43
PACSIN3-211ENST00000539589 C5orf63A6NC05 138 aa17.71■□□□□ 0.43
PACSIN3-211ENST00000539589 SGCEO43556 437 aa17.71■□□□□ 0.43
PACSIN3-211ENST00000539589 DHRS3O75911 302 aa17.71■□□□□ 0.43
PACSIN3-211ENST00000539589 CPN1P15169 458 aa17.71■□□□□ 0.43
PACSIN3-211ENST00000539589 ZNF260Q3ZCT1 412 aa17.71■□□□□ 0.43
PACSIN3-211ENST00000539589 GLIPR1L1Q6UWM5 242 aa17.71■□□□□ 0.43
PACSIN3-211ENST00000539589 CHST4Q8NCG5 386 aa17.71■□□□□ 0.43
PACSIN3-211ENST00000539589 SPACA5Q96QH8 159 aa17.71■□□□□ 0.43
PACSIN3-211ENST00000539589 ZNF436Q9C0F3 470 aaPredicted RBP17.71■□□□□ 0.43
PACSIN3-211ENST00000539589 NPDC1Q9NQX5 325 aaPredicted RBP17.71■□□□□ 0.43
PACSIN3-211ENST00000539589 ZNF69Q9UC07 566 aa17.71■□□□□ 0.43
PACSIN3-211ENST00000539589 HSPB11Q9Y547 144 aa17.71■□□□□ 0.43
PACSIN3-211ENST00000539589 V9GYS6 101 aa17.71■□□□□ 0.43
PACSIN3-211ENST00000539589 TRGV5A0A0B4J1U4 118 aa17.71■□□□□ 0.42
PACSIN3-211ENST00000539589 K7EM74 188 aa17.71■□□□□ 0.42
PACSIN3-211ENST00000539589 MTRF1O75570 445 aaKnown RBP17.71■□□□□ 0.42
PACSIN3-211ENST00000539589 ACTL6AO96019 429 aa17.71■□□□□ 0.42
PACSIN3-211ENST00000539589 THBS4P35443 961 aa17.71■□□□□ 0.42
PACSIN3-211ENST00000539589 SCRN3Q0VDG4 424 aa17.71■□□□□ 0.42
PACSIN3-211ENST00000539589 CDNFQ49AH0 187 aa17.71■□□□□ 0.42
PACSIN3-211ENST00000539589 LAMTOR1Q6IAA8 161 aa17.71■□□□□ 0.42
PACSIN3-211ENST00000539589 OR52H1Q8NGJ2 320 aa17.71■□□□□ 0.42
PACSIN3-211ENST00000539589 KCNG3Q8TAE7 436 aa17.71■□□□□ 0.42
PACSIN3-211ENST00000539589 ALKBH3Q96Q83 286 aaPredicted RBP17.71■□□□□ 0.42
PACSIN3-211ENST00000539589 GPER1Q99527 375 aa17.71■□□□□ 0.42
PACSIN3-211ENST00000539589 OR10A2Q9H208 303 aa17.71■□□□□ 0.42
PACSIN3-211ENST00000539589 LDAHQ9H6V9 325 aa17.71■□□□□ 0.42
PACSIN3-211ENST00000539589 NPTNQ9Y639 398 aa17.71■□□□□ 0.42
PACSIN3-211ENST00000539589 ZNF736B4DX44 427 aaPredicted RBP17.7■□□□□ 0.42
PACSIN3-211ENST00000539589 RLN1P04808 185 aa17.7■□□□□ 0.42
PACSIN3-211ENST00000539589 CHRM2P08172 466 aa17.7■□□□□ 0.42
PACSIN3-211ENST00000539589 DBHP09172 617 aa17.7■□□□□ 0.42
PACSIN3-211ENST00000539589 EIF2S3P41091 472 aaKnown RBP17.7■□□□□ 0.42
PACSIN3-211ENST00000539589 ZP1P60852 638 aa17.7■□□□□ 0.42
PACSIN3-211ENST00000539589 ZNF626Q68DY1 528 aa17.7■□□□□ 0.42
PACSIN3-211ENST00000539589 TMEM53Q6P2H8 277 aa17.7■□□□□ 0.42
PACSIN3-211ENST00000539589 IGFL3Q6UXB1 125 aa17.7■□□□□ 0.42
PACSIN3-211ENST00000539589 SEZ6L2Q6UXD5 910 aa17.7■□□□□ 0.42
PACSIN3-211ENST00000539589 ZNF584Q8IVC4 421 aa17.7■□□□□ 0.42
PACSIN3-211ENST00000539589 ZNF431Q8TF32 576 aaPredicted RBP17.7■□□□□ 0.42
PACSIN3-211ENST00000539589 PP6455Q8WZ26 134 aa17.7■□□□□ 0.42
PACSIN3-211ENST00000539589 UPB1Q9UBR1 384 aa17.7■□□□□ 0.42
PACSIN3-211ENST00000539589 SCP2D1Q9UJQ7 156 aa17.7■□□□□ 0.42
PACSIN3-211ENST00000539589 ELF5Q9UKW6 265 aaPredicted RBP17.7■□□□□ 0.42
PACSIN3-211ENST00000539589 RTTNQ86VV8 2226 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 IGKV1-9A0A0C4DH69 117 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 MELTFP08582 738 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 OR3A4PP47883 348 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 FAM189A2Q15884 450 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 DRAM2Q6UX65 266 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 Q6ZSR3 168 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 CHMP1BQ7LBR1 199 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 SLC7A5P1Q8MH63 180 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 SPICQ8N5J4 248 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 OR10R2Q8NGX6 335 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 TMEM45BQ96B21 275 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 C10orf35Q96D05 121 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 CMBLQ96DG6 245 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 WDYHV1Q96HA8 205 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 FOXB1Q99853 325 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 DLL4Q9NR61 685 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 MGAT4AQ9UM21 535 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 MED12LQ86YW9 2145 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 PIEZO1Q92508 2521 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 SYNGR3O43761 229 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 UBBP0CG47 229 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 PRF1P14222 555 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 B4GALT1P15291 398 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 CRYGSP22914 178 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 CEACAM16Q2WEN9 425 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 SLC36A1Q7Z2H8 476 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 RNF144BQ7Z419 303 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 FJX1Q86VR8 437 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 C9orf62Q8N4C0 152 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 PNLDC1Q8NA58 520 aaKnown RBP17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 OR1F12Q8NHA8 337 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 FNDC9Q8TBE3 224 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 SSC4DQ8WTU2 575 aa17.69■□□□□ 0.42
PACSIN3-211ENST00000539589 PTPRQQ9UMZ3 2332 aa17.68■□□□□ 0.42
PACSIN3-211ENST00000539589 UBE2QL1A1L167 161 aa17.68■□□□□ 0.42
PACSIN3-211ENST00000539589 WIPF3A6NGB9 483 aa17.68■□□□□ 0.42
PACSIN3-211ENST00000539589 AKR7A2O43488 359 aa17.68■□□□□ 0.42
PACSIN3-211ENST00000539589 ALX3O95076 343 aa17.68■□□□□ 0.42
PACSIN3-211ENST00000539589 CD74P04233 296 aa17.68■□□□□ 0.42
PACSIN3-211ENST00000539589 ZNF24P17028 368 aa17.68■□□□□ 0.42
PACSIN3-211ENST00000539589 PCBD1P61457 104 aa17.68■□□□□ 0.42
PACSIN3-211ENST00000539589 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.68■□□□□ 0.42
PACSIN3-211ENST00000539589 TRAPPC6BQ86SZ2 158 aa17.68■□□□□ 0.42
PACSIN3-211ENST00000539589 ZADH2Q8N4Q0 377 aa17.68■□□□□ 0.42
PACSIN3-211ENST00000539589 GRPEL2Q8TAA5 225 aa17.68■□□□□ 0.42
PACSIN3-211ENST00000539589 EXO5Q9H790 373 aa17.68■□□□□ 0.42
PACSIN3-211ENST00000539589 GPR35Q9HC97 309 aa17.68■□□□□ 0.42
PACSIN3-211ENST00000539589 TIMM10BQ9Y5J6 103 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms