RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 TAS2R46P59540 309 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 FOXF1Q12946 379 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 EIF3IQ13347 325 aaKnown RBP8.54□□□□□ -1.04
CDH13-204ENST00000539548 RAB32Q13637 225 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 ARFRP1Q13795 201 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 SHHQ15465 462 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 SURF2Q15527 256 aaPredicted RBP8.54□□□□□ -1.04
CDH13-204ENST00000539548 KCNMB1Q16558 191 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 DEFB133Q30KQ1 61 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 SLC25A53Q5H9E4 307 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 SLC25A47Q6Q0C1 308 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 C16orf47Q6ZP98 133 aaPredicted RBP8.54□□□□□ -1.04
CDH13-204ENST00000539548 EMG1Q92979 244 aaKnown RBP8.54□□□□□ -1.04
CDH13-204ENST00000539548 NECAB3Q96P71 396 aaPredicted RBP8.54□□□□□ -1.04
CDH13-204ENST00000539548 C12orf57Q99622 126 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 OR10A2Q9H208 303 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 HRH4Q9H3N8 390 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 PRR13Q9NZ81 148 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 VDAC3Q9Y277 283 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 MEMO1Q9Y316 297 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 FAM96BQ9Y3D0 163 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 ADAMTS9Q9P2N4 1935 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 MYO9BQ13459 2157 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 A0A1B0GX78 115 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 MEX3AA1L020 520 aaKnown RBP8.53□□□□□ -1.04
CDH13-204ENST00000539548 FOXI3A8MTJ6 420 aaPredicted RBP8.53□□□□□ -1.04
CDH13-204ENST00000539548 LMO7DNF2Z398 122 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 CD5P06127 495 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 HCKP08631 526 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 PGA4P0DJD7 388 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 PGA3P0DJD8 388 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 FOLR1P15328 257 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 GLRA1P23415 457 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 SULT1A2P50226 295 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 P2RY4P51582 365 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 ZNF121P58317 390 aaPredicted RBP8.53□□□□□ -1.04
CDH13-204ENST00000539548 CLRN1P58418 232 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 PDZK1IP1Q13113 114 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 C1orf189Q5VU69 101 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 BTNL8Q6UX41 500 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 DOK3Q7L591 496 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 ABHD12BQ7Z5M8 362 aaPredicted RBP8.53□□□□□ -1.04
CDH13-204ENST00000539548 TMEM200AQ86VY9 491 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 UEVLDQ8IX04 471 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 ADPRHL1Q8NDY3 354 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 OR51F2Q8NH61 342 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 RXFP4Q8TDU9 374 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 SOX7Q9BT81 388 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 IFT22Q9H7X7 185 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 SEC61A2Q9H9S3 476 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 OR2S2Q9NQN1 319 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 ZNF319Q9P2F9 582 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 POMT1Q9Y6A1 747 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 REV3LO60673 3130 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 FER1L5A0AVI2 2057 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 DNAH14Q0VDD8 3507 aa8.53□□□□□ -1.04
CDH13-204ENST00000539548 A0A1W2PP11 408 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 LRP3O75074 770 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 IGHG1P01857 330 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 IFNA4P05014 189 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 FCGR3AP08637 254 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 HKR1P10072 659 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 NFYBP25208 207 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 CD27P26842 260 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 MSX1P28360 303 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 ALDH3B1P43353 468 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 LPAR6P43657 344 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 DHPSP49366 369 aaPredicted RBP8.52□□□□□ -1.04
CDH13-204ENST00000539548 OR1D5P58170 312 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 CSNK2A1P68400 391 aaPredicted RBP8.52□□□□□ -1.04
CDH13-204ENST00000539548 GABREP78334 506 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 S100A12P80511 92 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 MYBPHQ13203 477 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 RPL7L1Q6DKI1 246 aaKnown RBP8.52□□□□□ -1.04
CDH13-204ENST00000539548 Q6ZS52 159 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 COMMD2Q86X83 199 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 NFAM1Q8NET5 270 aaPredicted RBP8.52□□□□□ -1.04
CDH13-204ENST00000539548 CSNK2A3Q8NEV1 391 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 NOXO1Q8NFA2 376 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 RNF138Q8WVD3 245 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 RLN3Q8WXF3 142 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 FAM71F1Q96KD3 344 aaPredicted RBP8.52□□□□□ -1.04
CDH13-204ENST00000539548 MRGPRX4Q96LA9 322 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 OR5B2Q96R09 309 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 GPER1Q99527 375 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 NUDT22Q9BRQ3 303 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 ST6GALNAC5Q9BVH7 336 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 TAF9BQ9HBM6 251 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 SDHAF3Q9NRP4 125 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 SEMA5BQ9P283 1151 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 GHRLQ9UBU3 117 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 ATXN7L1Q9ULK2 861 aaPredicted RBP8.52□□□□□ -1.04
CDH13-204ENST00000539548 POLR1DQ9Y2S0 133 aa8.52□□□□□ -1.04
CDH13-204ENST00000539548 IGHV1OR21-1A0A087WYE8 117 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 IGHV3-20A0A0C4DH32 117 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 IGKV1-9A0A0C4DH69 117 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 PMS2P1A4D2B8 440 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 COLCA2A8K830 154 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 H3BML4 177 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 SDCBPO00560 298 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms