RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 PELI1Q96FA3 418 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 ALG8Q9BVK2 526 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 FGF20Q9NP95 211 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-206ENST00000539417 ERVK13-1Q9NX77 482 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 SNX5Q9Y5X3 404 aa13.27□□□□□ -0.29
RPAIN-206ENST00000539417 NF1P21359 2839 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 ZNF850A8MQ14 1090 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 E9PI62 339 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 GMDSO60547 372 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 HEXAP06865 529 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 GRPP07492 148 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 FAHP16930 419 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 TNFRSF1AP19438 455 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 CFL1P23528 166 aaKnown RBP13.26□□□□□ -0.29
RPAIN-206ENST00000539417 THBS2P35442 1172 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 SRP9P49458 86 aaKnown RBP13.26□□□□□ -0.29
RPAIN-206ENST00000539417 LMO4P61968 165 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 PRDX4Q13162 271 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 GALEQ14376 348 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 ZNF826PQ6ZT77 177 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 COMMD2Q86X83 199 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 C8orf59Q8N0T1 100 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-206ENST00000539417 PLPP7Q8NBV4 271 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 SETD9Q8NE22 299 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 C19orf18Q8NEA5 215 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 HPSE2Q8WWQ2 592 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 GGHQ92820 318 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 C4orf36Q96KX1 117 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 PAPOLGQ9BWT3 736 aaKnown RBP13.26□□□□□ -0.29
RPAIN-206ENST00000539417 ABCA1O95477 2261 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 ZFHX3Q15911 3703 aa13.26□□□□□ -0.29
RPAIN-206ENST00000539417 FAM157AC9JC47 383 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 TMEM178BH3BS89 294 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 PTBP3O95758 552 aaKnown RBP13.25□□□□□ -0.29
RPAIN-206ENST00000539417 FADS2O95864 444 aaKnown RBP13.25□□□□□ -0.29
RPAIN-206ENST00000539417 IGHV2-70P01814 119 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 ZNF16P17020 682 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-206ENST00000539417 GATA4P43694 442 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 ETV1P50549 477 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 DOC2BQ14184 412 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 ZMYND11Q15326 602 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 SNCBQ16143 134 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 C11orf53Q8IXP5 236 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 OR14K1Q8NGZ2 314 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 PIGCQ92535 297 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 MSI2Q96DH6 328 aaKnown RBP13.25□□□□□ -0.29
RPAIN-206ENST00000539417 ITPKCQ96DU7 683 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 VCXQ9H320 206 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 MOB1AQ9H8S9 216 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 FRRS1LQ9P0K9 344 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 CLEC2DQ9UHP7 191 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 PCDHGB1Q9Y5G3 927 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 NPTNQ9Y639 398 aa13.25□□□□□ -0.29
RPAIN-206ENST00000539417 NSD1Q96L73 2696 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-206ENST00000539417 NIPBLQ6KC79 2804 aaeCLIP13.24□□□□□ -0.29
RPAIN-206ENST00000539417 CST4P01036 141 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 MAP2K3P46734 347 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 CHN2P52757 468 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 CSNK2BP67870 215 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 CEP78Q5JTW2 689 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 IZUMO2Q6UXV1 221 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 Q6ZSR3 168 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 THAP5Q7Z6K1 395 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 CSNK2A3Q8NEV1 391 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 SEMA6DQ8NFY4 1073 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 OR2G2Q8NGZ5 317 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 SLC22A4Q9H015 551 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 METTL17Q9H7H0 456 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-206ENST00000539417 ZNF391Q9UJN7 358 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 PIGLQ9Y2B2 252 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 PCDHGB5Q9Y5G0 923 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 HSPE1-MOB4S4R3N1 261 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 V9GYS6 101 aa13.24□□□□□ -0.29
RPAIN-206ENST00000539417 H0YJX3 145 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 CD5LO43866 347 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 DHRS3O75911 302 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 CCL1P22362 96 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 KLHL22Q53GT1 634 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 OR2G6Q5TZ20 316 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 XAF1Q6GPH4 301 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 KRT74Q7RTS7 529 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 FAM220AQ7Z4H9 259 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 CELF2-AS1Q8N7Q2 184 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 OR10AC1Q8NH08 325 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 OR8S1Q8NH09 359 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 OR5P3Q8WZ94 311 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 SGCDQ92629 289 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 C1orf123Q9NWV4 160 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 ZNF816-ZNF321PA0A0X1KG74 233 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 ISPDA4D126 451 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 INAFM1C9JVW0 142 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 FN1P02751 2386 aaKnown RBP13.23□□□□□ -0.29
RPAIN-206ENST00000539417 EGR1P18146 543 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 GTF2A1P52655 376 aaPredicted RBP13.23□□□□□ -0.29
RPAIN-206ENST00000539417 RIPPLY1Q0D2K3 151 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 ZNF154Q13106 437 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 FDX2Q6P4F2 183 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 BPIFB6Q8NFQ5 453 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 OR1M1Q8NGA1 313 aa13.23□□□□□ -0.29
RPAIN-206ENST00000539417 Q8TCH9 128 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms