RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 SLC22A4Q9H015 551 aa8.84□□□□□ -0.99
CLPB-210ENST00000539148 RNF167Q9H6Y7 350 aa8.84□□□□□ -0.99
CLPB-210ENST00000539148 PLEKHA1Q9HB21 404 aa8.84□□□□□ -0.99
CLPB-210ENST00000539148 ABCB9Q9NP78 766 aa8.84□□□□□ -0.99
CLPB-210ENST00000539148 CYSLTR2Q9NS75 346 aa8.84□□□□□ -0.99
CLPB-210ENST00000539148 FAM206AQ9NX38 181 aa8.84□□□□□ -0.99
CLPB-210ENST00000539148 NPAP1Q9NZP6 1156 aa8.84□□□□□ -0.99
CLPB-210ENST00000539148 N6AMT1Q9Y5N5 214 aa8.84□□□□□ -0.99
CLPB-210ENST00000539148 USP9XQ93008 2570 aaPredicted RBP8.84□□□□□ -0.99
CLPB-210ENST00000539148 RTTNQ86VV8 2226 aa8.84□□□□□ -0.99
CLPB-210ENST00000539148 TEX15Q9BXT5 2789 aa8.83□□□□□ -1
CLPB-210ENST00000539148 A0A1B0GVG6 124 aa8.83□□□□□ -1
CLPB-210ENST00000539148 FUOMA2VDF0 154 aa8.83□□□□□ -1
CLPB-210ENST00000539148 GGT3PA6NGU5 568 aa8.83□□□□□ -1
CLPB-210ENST00000539148 A6NNC1 897 aa8.83□□□□□ -1
CLPB-210ENST00000539148 ATP6V1G2-DDX39BF2Z307 99 aa8.83□□□□□ -1
CLPB-210ENST00000539148 SYT7O43581 403 aa8.83□□□□□ -1
CLPB-210ENST00000539148 SMPD2O60906 423 aa8.83□□□□□ -1
CLPB-210ENST00000539148 HLA-DQB1P01920 261 aa8.83□□□□□ -1
CLPB-210ENST00000539148 ERCC1P07992 297 aaPredicted RBP8.83□□□□□ -1
CLPB-210ENST00000539148 CELA3BP08861 270 aa8.83□□□□□ -1
CLPB-210ENST00000539148 DBHP09172 617 aa8.83□□□□□ -1
CLPB-210ENST00000539148 CCL2P13500 99 aa8.83□□□□□ -1
CLPB-210ENST00000539148 ACHEP22303 614 aa8.83□□□□□ -1
CLPB-210ENST00000539148 SSTR2P30874 369 aa8.83□□□□□ -1
CLPB-210ENST00000539148 APOBEC3AP31941 199 aaPredicted RBP8.83□□□□□ -1
CLPB-210ENST00000539148 INPP1P49441 399 aa8.83□□□□□ -1
CLPB-210ENST00000539148 KLF3P57682 345 aaPredicted RBP8.83□□□□□ -1
CLPB-210ENST00000539148 MRPS10P82664 201 aaKnown RBP8.83□□□□□ -1
CLPB-210ENST00000539148 Q499Y3 187 aa8.83□□□□□ -1
CLPB-210ENST00000539148 ZBTB37Q5TC79 503 aa8.83□□□□□ -1
CLPB-210ENST00000539148 ADAM5Q6NVV9 412 aa8.83□□□□□ -1
CLPB-210ENST00000539148 FBXW12Q6X9E4 464 aa8.83□□□□□ -1
CLPB-210ENST00000539148 FBXL14Q8N1E6 418 aa8.83□□□□□ -1
CLPB-210ENST00000539148 RFLNBQ8N5W9 214 aa8.83□□□□□ -1
CLPB-210ENST00000539148 ACBD4Q8NC06 268 aa8.83□□□□□ -1
CLPB-210ENST00000539148 C19orf18Q8NEA5 215 aa8.83□□□□□ -1
CLPB-210ENST00000539148 SYNPRQ8TBG9 265 aa8.83□□□□□ -1
CLPB-210ENST00000539148 CHAC2Q8WUX2 184 aa8.83□□□□□ -1
CLPB-210ENST00000539148 DEDD2Q8WXF8 326 aa8.83□□□□□ -1
CLPB-210ENST00000539148 CPNE2Q96FN4 548 aaPredicted RBP8.83□□□□□ -1
CLPB-210ENST00000539148 REEP6Q96HR9 211 aa8.83□□□□□ -1
CLPB-210ENST00000539148 TECTBQ96PL2 329 aa8.83□□□□□ -1
CLPB-210ENST00000539148 SOSTQ9BQB4 213 aa8.83□□□□□ -1
CLPB-210ENST00000539148 SRRQ9GZT4 340 aa8.83□□□□□ -1
CLPB-210ENST00000539148 OCEL1Q9H607 264 aa8.83□□□□□ -1
CLPB-210ENST00000539148 CA10Q9NS85 328 aa8.83□□□□□ -1
CLPB-210ENST00000539148 CKLFQ9UBR5 152 aa8.83□□□□□ -1
CLPB-210ENST00000539148 V9GYH0 126 aa8.83□□□□□ -1
CLPB-210ENST00000539148 MYO9AB2RTY4 2548 aa8.82□□□□□ -1
CLPB-210ENST00000539148 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.82□□□□□ -1
CLPB-210ENST00000539148 MEGF11A6BM72 1044 aa8.82□□□□□ -1
CLPB-210ENST00000539148 ANKRD30BLA7E2S9 258 aa8.82□□□□□ -1
CLPB-210ENST00000539148 SULT1B1O43704 296 aa8.82□□□□□ -1
CLPB-210ENST00000539148 DHRS3O75911 302 aa8.82□□□□□ -1
CLPB-210ENST00000539148 HNRNPCP07910 306 aaKnown RBP eCLIP8.82□□□□□ -1
CLPB-210ENST00000539148 FAM157BP0CG42 384 aa8.82□□□□□ -1
CLPB-210ENST00000539148 CALCBP10092 127 aa8.82□□□□□ -1
CLPB-210ENST00000539148 PSKH1P11801 424 aa8.82□□□□□ -1
CLPB-210ENST00000539148 ZNF20P17024 532 aa8.82□□□□□ -1
CLPB-210ENST00000539148 CFPP27918 469 aa8.82□□□□□ -1
CLPB-210ENST00000539148 GNALP38405 381 aa8.82□□□□□ -1
CLPB-210ENST00000539148 PSMB10P40306 273 aa8.82□□□□□ -1
CLPB-210ENST00000539148 SRSF1Q07955 248 aaKnown RBP eCLIP8.82□□□□□ -1
CLPB-210ENST00000539148 RSPO1Q2MKA7 263 aaPredicted RBP8.82□□□□□ -1
CLPB-210ENST00000539148 GFOD2Q3B7J2 385 aa8.82□□□□□ -1
CLPB-210ENST00000539148 PYDC2Q56P42 97 aa8.82□□□□□ -1
CLPB-210ENST00000539148 WDR38Q5JTN6 314 aa8.82□□□□□ -1
CLPB-210ENST00000539148 MBNL2Q5VZF2 373 aaKnown RBP8.82□□□□□ -1
CLPB-210ENST00000539148 TRIQKQ629K1 86 aa8.82□□□□□ -1
CLPB-210ENST00000539148 PYHIN1Q6K0P9 492 aa8.82□□□□□ -1
CLPB-210ENST00000539148 SFXN4Q6P4A7 337 aa8.82□□□□□ -1
CLPB-210ENST00000539148 LAX1Q8IWV1 398 aa8.82□□□□□ -1
CLPB-210ENST00000539148 ZFP41Q8N8Y5 198 aa8.82□□□□□ -1
CLPB-210ENST00000539148 DRAXINQ8NBI3 349 aaPredicted RBP8.82□□□□□ -1
CLPB-210ENST00000539148 SEMA6DQ8NFY4 1073 aa8.82□□□□□ -1
CLPB-210ENST00000539148 OR8B12Q8NGG6 310 aa8.82□□□□□ -1
CLPB-210ENST00000539148 TSEN15Q8WW01 171 aaKnown RBP8.82□□□□□ -1
CLPB-210ENST00000539148 SLC7A6Q92536 515 aa8.82□□□□□ -1
CLPB-210ENST00000539148 FBXW5Q969U6 566 aa8.82□□□□□ -1
CLPB-210ENST00000539148 SPSB4Q96A44 273 aa8.82□□□□□ -1
CLPB-210ENST00000539148 HIST1H2AAQ96QV6 131 aa8.82□□□□□ -1
CLPB-210ENST00000539148 DIRC2Q96SL1 478 aa8.82□□□□□ -1
CLPB-210ENST00000539148 DHRS9Q9BPW9 319 aa8.82□□□□□ -1
CLPB-210ENST00000539148 C7orf50Q9BRJ6 194 aaKnown RBP8.82□□□□□ -1
CLPB-210ENST00000539148 NKIRAS2Q9NYR9 191 aa8.82□□□□□ -1
CLPB-210ENST00000539148 FRRS1LQ9P0K9 344 aa8.82□□□□□ -1
CLPB-210ENST00000539148 COMMD3Q9UBI1 195 aa8.82□□□□□ -1
CLPB-210ENST00000539148 DHDHQ9UQ10 334 aa8.82□□□□□ -1
CLPB-210ENST00000539148 SLC22A13Q9Y226 551 aa8.82□□□□□ -1
CLPB-210ENST00000539148 STARD10Q9Y365 291 aa8.82□□□□□ -1
CLPB-210ENST00000539148 ETV7Q9Y603 341 aa8.82□□□□□ -1
CLPB-210ENST00000539148 SPENQ96T58 3664 aaKnown RBP8.82□□□□□ -1
CLPB-210ENST00000539148 CADP27708 2225 aa8.82□□□□□ -1
CLPB-210ENST00000539148 PRR14LQ5THK1 2151 aa8.82□□□□□ -1
CLPB-210ENST00000539148 A1L4Q6 167 aa8.81□□□□□ -1
CLPB-210ENST00000539148 OR4C45A6NMZ5 311 aa8.81□□□□□ -1
CLPB-210ENST00000539148 CENPXA8MT69 81 aa8.81□□□□□ -1
CLPB-210ENST00000539148 DEFB108AA8MXU0 73 aa8.81□□□□□ -1
CLPB-210ENST00000539148 B9A039 149 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms