RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 NOP16Q9Y3C1 178 aaKnown RBP13.29□□□□□ -0.28
VAMP1-207ENST00000539047 HEATR1Q9H583 2144 aaKnown RBP13.28□□□□□ -0.28
VAMP1-207ENST00000539047 VSTM5A8MXK1 200 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 RGS5O15539 181 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 NCR1O76036 304 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 EPXP11678 715 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 IGFBP3P17936 291 aaPredicted RBP13.28□□□□□ -0.28
VAMP1-207ENST00000539047 SPOCK1Q08629 439 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 DYNC1I2Q13409 638 aaKnown RBP13.28□□□□□ -0.28
VAMP1-207ENST00000539047 HLXQ14774 488 aaPredicted RBP13.28□□□□□ -0.28
VAMP1-207ENST00000539047 PLCXD3Q63HM9 321 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 LRRTM1Q86UE6 522 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 JAGN1Q8N5M9 183 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 ZNF671Q8TAW3 534 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 SLC25A40Q8TBP6 338 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 ITLN2Q8WWU7 325 aaPredicted RBP13.28□□□□□ -0.28
VAMP1-207ENST00000539047 PIGTQ969N2 578 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 SPSB1Q96BD6 273 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 CEP19Q96LK0 163 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 WFIKKN1Q96NZ8 548 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 SORCS2Q96PQ0 1159 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 HIST1H2AAQ96QV6 131 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 GPER1Q99527 375 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 SOX7Q9BT81 388 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 OR2J1Q9GZK6 312 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 SLIRPQ9GZT3 109 aaKnown RBP13.28□□□□□ -0.28
VAMP1-207ENST00000539047 SMURF1Q9HCE7 757 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 POU2F3Q9UKI9 436 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 PEX16Q9Y5Y5 336 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 HCFC1P51610 2035 aa13.28□□□□□ -0.28
VAMP1-207ENST00000539047 A0A075B6Q4 140 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 SHISA3A0PJX4 238 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 A6NIN4 97 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 CD300LBA8K4G0 201 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 AIPO00170 330 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 ALX3O95076 343 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 NRASP01111 189 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 ATF1P18846 271 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 ANOS1P23352 680 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 CALCRP30988 508 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 CAV3P56539 151 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 OR10A3P58181 314 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 RAB11BQ15907 218 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 SLC22A25Q6T423 547 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 CDH26Q8IXH8 852 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 PIGCQ92535 297 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 ABRACLQ9P1F3 81 aa13.27□□□□□ -0.29
VAMP1-207ENST00000539047 IFITM5A6NNB3 132 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 ATP6V1G2-DDX39BF2Z307 99 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 ABCD4O14678 606 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 MAST4O15021 2626 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 TIMM8AO60220 97 aaPredicted RBP13.26□□□□□ -0.29
VAMP1-207ENST00000539047 ALDOBP05062 364 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 THBDP07204 575 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 CD3EP07766 207 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 ACKR3P25106 362 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 AZGP1P25311 298 aaKnown RBP13.26□□□□□ -0.29
VAMP1-207ENST00000539047 BSPH1Q075Z2 132 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 BEX5Q5H9J7 111 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 LINC00299Q6ZSB3 139 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 ZDHHC23Q8IYP9 409 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 NUP37Q8NFH4 326 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 OR6M1Q8NGM8 313 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 CMBLQ96DG6 245 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 UQCC2Q9BRT2 126 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 BARHL1Q9BZE3 327 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 POFUT1Q9H488 388 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 METTL17Q9H7H0 456 aaPredicted RBP13.26□□□□□ -0.29
VAMP1-207ENST00000539047 GPR173Q9NS66 373 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 STEAP1Q9UHE8 339 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 MPC1Q9Y5U8 109 aa13.26□□□□□ -0.29
VAMP1-207ENST00000539047 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.25□□□□□ -0.29
VAMP1-207ENST00000539047 SLC17A2O00624 439 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 CST4P01036 141 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 ADRA2CP18825 462 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 GLRXP35754 106 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 ZNF93P35789 620 aaPredicted RBP13.25□□□□□ -0.29
VAMP1-207ENST00000539047 SCAND1P57086 179 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 KLF3P57682 345 aaPredicted RBP13.25□□□□□ -0.29
VAMP1-207ENST00000539047 PRDX4Q13162 271 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 MOGQ16653 247 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 HES5Q5TA89 166 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 MBNL2Q5VZF2 373 aaKnown RBP13.25□□□□□ -0.29
VAMP1-207ENST00000539047 OR2T2Q6IF00 324 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 ZNF529Q6P280 563 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 LHFPL2Q6ZUX7 228 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 MOB3CQ70IA8 216 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 BHLHE23Q8NDY6 225 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 DNAAF1Q8NEP3 725 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 OR51A2Q8NGJ7 313 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 SYNPRQ8TBG9 265 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 KLF14Q8TD94 323 aaPredicted RBP13.25□□□□□ -0.29
VAMP1-207ENST00000539047 HAVCR1Q96D42 359 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 BORCS8Q96FH0 119 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 MARS2Q96GW9 593 aaKnown RBP13.25□□□□□ -0.29
VAMP1-207ENST00000539047 S100A13Q99584 98 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 NXF2Q9GZY0 626 aaKnown RBP13.25□□□□□ -0.29
VAMP1-207ENST00000539047 SLC22A4Q9H015 551 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 NKIRAS2Q9NYR9 191 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 MRPL15Q9P015 296 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms