RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 ZNF735P0CB33 412 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 DUX4L2P0CJ85 424 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 DUX4L3P0CJ86 424 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 DUX4L4P0CJ87 422 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 DUX4L5P0CJ88 424 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 DUX4L6P0CJ89 424 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 DUX4L7P0CJ90 424 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 SLC2A1P11166 492 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 ABOP16442 354 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 KLK2P20151 261 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 CRYGSP22914 178 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 CD34P28906 385 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 CD96P40200 585 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 PTGFRP43088 359 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 OR3A4PP47883 348 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 CXADRP78310 365 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 SRSF4Q08170 494 aaKnown RBP5.82□□□□□ -1.48
USP28-206ENST00000538224 KISS1Q15726 138 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 MOGAT2Q3SYC2 334 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 LGALSLQ3ZCW2 172 aaPredicted RBP5.82□□□□□ -1.48
USP28-206ENST00000538224 SCGB2B2Q4G0G5 96 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 PHYHD1Q5SRE7 291 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 B3GNTL1Q67FW5 361 aaPredicted RBP5.82□□□□□ -1.48
USP28-206ENST00000538224 OR10K2Q6IF99 312 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 LHFPL2Q6ZUX7 228 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 SLC16A14Q7RTX9 510 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 TMED4Q7Z7H5 227 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 DPPA2Q7Z7J5 298 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 LYG2Q86SG7 212 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 SLC25A42Q86VD7 318 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 MUC20Q8N307 709 aaPredicted RBP5.82□□□□□ -1.48
USP28-206ENST00000538224 GALNT16Q8N428 558 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 LRRC18Q8N456 261 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 FAM89BQ8N5H3 189 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 ZNF680Q8NEM1 530 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 OR2M7Q8NG81 312 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 OR11H4Q8NGC9 324 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 OR5M8Q8NGP6 311 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 HAS2Q92819 552 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 DVL3Q92997 716 aaPredicted RBP5.82□□□□□ -1.48
USP28-206ENST00000538224 ELMOD3Q96FG2 381 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 POM121Q96HA1 1249 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 PHB2Q99623 299 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 OCSTAMPQ9BR26 566 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 TM2D1Q9BX74 207 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 CHIAQ9BZP6 476 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 TINAGL1Q9GZM7 467 aaPredicted RBP5.82□□□□□ -1.48
USP28-206ENST00000538224 ZNF703Q9H7S9 590 aaPredicted RBP5.82□□□□□ -1.48
USP28-206ENST00000538224 CRLF2Q9HC73 371 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 COMMD9Q9P000 198 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 PIPOXQ9P0Z9 390 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 DUX4Q9UBX2 424 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 SLC23A1Q9UHI7 598 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 PIGLQ9Y2B2 252 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 TIMM10BQ9Y5J6 103 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 NCOA6Q14686 2063 aaPredicted RBP5.82□□□□□ -1.48
USP28-206ENST00000538224 A0A0G2JMM0 328 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 A0A1W2PPB8 328 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 A0A1W2PRS3 328 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 LINC00862A6NCI5 91 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 OR14I1A6ND48 311 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 CEACAM18A8MTB9 384 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 ZNF724A8MTY0 619 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 KIR3DP1A8MWS1 328 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 G3V3Q6 166 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 KLRC4-KLRK1H3BQV0 150 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 MFNGO00587 321 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 TERTO14746 1132 aaKnown RBP5.81□□□□□ -1.48
USP28-206ENST00000538224 SYNGR3O43761 229 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 MRPL33O75394 65 aaKnown RBP5.81□□□□□ -1.48
USP28-206ENST00000538224 ACTL6AO96019 429 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 IL2RAP01589 272 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 HLA-AP01891 365 aaKnown RBP5.81□□□□□ -1.48
USP28-206ENST00000538224 ZNF806P0C7X5 589 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 COX5BP10606 129 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 ZNF35P13682 527 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 RPA2P15927 270 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 PPP3CBP16298 524 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 MGMTP16455 207 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 GNB3P16520 340 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 HLA-GP17693 338 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 NFYAP23511 347 aaPredicted RBP5.81□□□□□ -1.48
USP28-206ENST00000538224 ITGA3P26006 1051 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 S100A11P31949 105 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 HTR5AP47898 357 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 AP2S1P53680 142 aaPredicted RBP5.81□□□□□ -1.48
USP28-206ENST00000538224 SEC61A1P61619 476 aaKnown RBP5.81□□□□□ -1.48
USP28-206ENST00000538224 FOXO1Q12778 655 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 DHRS2Q13268 280 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 ARFRP1Q13795 201 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 OPCMLQ14982 345 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 GRK1Q15835 563 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 KRTAP27-1Q3LI81 207 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 CCDC157Q569K6 752 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 FAM209AQ5JX71 171 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 CLLU1Q5K131 121 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 WIPI1Q5MNZ9 446 aaPredicted RBP5.81□□□□□ -1.48
USP28-206ENST00000538224 DCAF10Q5QP82 559 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 ATPAF1Q5TC12 328 aaPredicted RBP5.81□□□□□ -1.48
USP28-206ENST00000538224 NSUN5P2Q63ZY6 315 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms