RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 IGLV3-1P01715 115 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 SERPINF1P36955 418 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 PTGFRP43088 359 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 ZNF273Q14593 569 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 KISS1Q15726 138 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 SGCAQ16586 387 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 MS4A7Q9GZW8 240 aaPredicted RBP14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 SHPKQ9UHJ6 478 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 PI4KAP42356 2102 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 A0A0U1RQV5 110 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 A0A1W2PP11 408 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 RAD51DO75771 328 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 APOC3P02656 99 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 MSR1P21757 451 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 ANOS1P23352 680 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 ARFRP1Q13795 201 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 GFOD2Q3B7J2 385 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 C10orf128Q5T292 105 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 CCDC36Q8IYA8 594 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 OR5AP2Q8NGF4 316 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 OR5H2Q8NGV7 314 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 SAP25Q8TEE9 199 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 PGAM5Q96HS1 289 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 NELFAQ9H3P2 528 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 WDR54Q9H977 334 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 AKIRIN1Q9H9L7 192 aaPredicted RBP14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 RAB18Q9NP72 206 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 TEX13DA0A0J9YY54 714 aaPredicted RBP14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 TRIM77I1YAP6 450 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 CDK2AP1O14519 115 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 EIF1BO60739 113 aaKnown RBP14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 VAMP5O95183 116 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 SFT2D2O95562 160 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 NAT2P11245 290 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 KLK2P20151 261 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 NPY4RP50391 375 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 PPIAP62937 165 aaKnown RBP14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 PRAMEF20Q5VT98 475 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 ELP2Q6IA86 826 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 PEG10Q86TG7 708 aaKnown RBP14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 ARMC10Q8N2F6 343 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 OR51T1Q8NGJ9 327 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 STOML3Q8TAV4 291 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 RNF126Q9BV68 326 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 PIGMQ9H3S5 423 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 ZNF160Q9HCG1 818 aa14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 NXT1Q9UKK6 140 aaKnown RBP14.11□□□□□ -0.15
CHMP1A-202ENST00000535997 RTTNQ86VV8 2226 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 LOC102723996A0A087X1L8 192 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 E9PLN8 166 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 F8VVB4 439 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 F8VWA3 439 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 PGAM2P15259 253 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 FPR2P25090 351 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 OR3A2P47893 321 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 CSNK1A1P48729 337 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 ZNF133P52736 654 aaPredicted RBP14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 CLEC18BQ6UXF7 455 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 PIK3IP1Q96FE7 263 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 FAM117AQ9C073 453 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 CSAG2Q9Y5P2 127 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 EML6Q6ZMW3 1958 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 WDPCPO95876 746 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 THBS4P35443 961 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 TAS2R46P59540 309 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 NAAAQ02083 359 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 IL11RAQ14626 422 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 ARL6IP1Q15041 203 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 PCOLCEQ15113 449 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 OPN5Q6U736 354 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 UQCC3Q6UW78 93 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 LHFPL1Q86WI0 220 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 PP6455Q8WZ26 134 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 TMEM54Q969K7 222 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 MARC2Q969Z3 335 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 TMEM230Q96A57 120 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 RTBDNQ9BSG5 229 aaPredicted RBP14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 C12orf4Q9NQ89 552 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 OCIAD1Q9NX40 245 aa14.1□□□□□ -0.15
CHMP1A-202ENST00000535997 FOXI3A8MTJ6 420 aaPredicted RBP14.09□□□□□ -0.15
CHMP1A-202ENST00000535997 DHRS3O75911 302 aa14.09□□□□□ -0.15
CHMP1A-202ENST00000535997 FGF5P12034 268 aa14.09□□□□□ -0.15
CHMP1A-202ENST00000535997 AMY2BP19961 511 aa14.09□□□□□ -0.15
CHMP1A-202ENST00000535997 DHPSP49366 369 aaPredicted RBP14.09□□□□□ -0.15
CHMP1A-202ENST00000535997 NSUN5P2Q63ZY6 315 aa14.09□□□□□ -0.15
CHMP1A-202ENST00000535997 UNQ6126/PRO20091Q6UXV3 157 aa14.09□□□□□ -0.15
CHMP1A-202ENST00000535997 FOXL2NBQ6ZUU3 175 aa14.09□□□□□ -0.15
CHMP1A-202ENST00000535997 SLC16A14Q7RTX9 510 aa14.09□□□□□ -0.15
CHMP1A-202ENST00000535997 DCUN1D4Q92564 292 aa14.09□□□□□ -0.15
CHMP1A-202ENST00000535997 NAT6Q93015 286 aa14.09□□□□□ -0.15
CHMP1A-202ENST00000535997 C10orf35Q96D05 121 aa14.09□□□□□ -0.15
CHMP1A-202ENST00000535997 LYZL4Q96KX0 146 aa14.09□□□□□ -0.15
CHMP1A-202ENST00000535997 ST6GALNAC5Q9BVH7 336 aa14.09□□□□□ -0.15
CHMP1A-202ENST00000535997 V9GYS6 101 aa14.09□□□□□ -0.15
CHMP1A-202ENST00000535997 RAB19A4D1S5 217 aa14.08□□□□□ -0.15
CHMP1A-202ENST00000535997 SERPINE3A8MV23 424 aa14.08□□□□□ -0.15
CHMP1A-202ENST00000535997 F5H5K5 113 aa14.08□□□□□ -0.15
CHMP1A-202ENST00000535997 APOC1P02654 83 aa14.08□□□□□ -0.15
CHMP1A-202ENST00000535997 HIST1H3AP68431 136 aa14.08□□□□□ -0.15
CHMP1A-202ENST00000535997 HIST2H3PS2Q5TEC6 136 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms