RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SNRNP35Q16560 246 aaKnown RBP2.43□□□□□ -2.02
PRKDC-205ENST00000535375 ZNF829Q3KNS6 432 aaPredicted RBP2.43□□□□□ -2.02
PRKDC-205ENST00000535375 TCEAL5Q5H9L2 206 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 SLC16A13Q7RTY0 426 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 DAW1Q8N136 415 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 FAM58AQ8N1B3 248 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 OR13C9Q8NGT0 318 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 OR8U1Q8NH10 309 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 TFGQ92734 400 aaPredicted RBP2.43□□□□□ -2.02
PRKDC-205ENST00000535375 TCEAL3Q969E4 200 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 HAUS1Q96CS2 278 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 SCGB3A2Q96PL1 93 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 TEAD3Q99594 435 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 OR52D1Q9H346 318 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 REEP1Q9H902 201 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 TMEM27Q9HBJ8 222 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 MYOZ1Q9NP98 299 aaPredicted RBP2.43□□□□□ -2.02
PRKDC-205ENST00000535375 RRAGDQ9NQL2 400 aaPredicted RBP2.43□□□□□ -2.02
PRKDC-205ENST00000535375 OR51B2Q9Y5P1 312 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 SBNO1A3KN83 1393 aa2.43□□□□□ -2.02
PRKDC-205ENST00000535375 KRBOX1C9JBD0 128 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 TAAR5O14804 337 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 CDC40O60508 579 aaKnown RBP eCLIP2.42□□□□□ -2.02
PRKDC-205ENST00000535375 POLR2IP36954 125 aaKnown RBP2.42□□□□□ -2.02
PRKDC-205ENST00000535375 ETV1P50549 477 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 AP1S2P56377 157 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 PSMC5P62195 406 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 RPL23P62829 140 aaKnown RBP2.42□□□□□ -2.02
PRKDC-205ENST00000535375 RPL18AQ02543 176 aaKnown RBP2.42□□□□□ -2.02
PRKDC-205ENST00000535375 HSP90AA4PQ58FG1 418 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 AADACL4Q5VUY2 407 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 AP1ARQ63HQ0 302 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 NKAIN4Q8IVV8 208 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 PDCL2Q8N4E4 241 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 CSGALNACT2Q8N6G5 542 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 GPR26Q8NDV2 337 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 C19orf18Q8NEA5 215 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 OR9A2Q8NGT5 310 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 ASZ1Q8WWH4 475 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 RCN3Q96D15 328 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 TIMM29Q9BSF4 260 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 TOLLIPQ9H0E2 274 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 TNS2Q63HR2 1409 aa2.42□□□□□ -2.02
PRKDC-205ENST00000535375 COL27A1Q8IZC6 1860 aaPredicted RBP2.41□□□□□ -2.02
PRKDC-205ENST00000535375 IGKV1-27A0A075B6S5 117 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 SMIM26A0A096LP01 95 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 HACD1B0YJ81 288 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 LINC01619G3V211 115 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 K7EM74 188 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 TNFRSF11BO00300 401 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 SLC22A5O76082 557 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 HLA-DQA1P01909 254 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 S100A9P06702 114 aaKnown RBP2.41□□□□□ -2.02
PRKDC-205ENST00000535375 HOXB8P17481 243 aaPredicted RBP2.41□□□□□ -2.02
PRKDC-205ENST00000535375 TCP1P17987 556 aaKnown RBP2.41□□□□□ -2.02
PRKDC-205ENST00000535375 PTNP21246 168 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 MYL9P24844 172 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 KIR3DL2P43630 455 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 CRADDP78560 199 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 XIAPP98170 497 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 MEF2BQ02080 365 aaPredicted RBP2.41□□□□□ -2.02
PRKDC-205ENST00000535375 KDSRQ06136 332 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 STK38Q15208 465 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 ZFP1Q6P2D0 407 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 RAB43Q86YS6 212 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 LRRC52Q8N7C0 313 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 WDR31Q8NA23 367 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 LINC01560Q8TB33 94 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 CACNG8Q8WXS5 425 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 SMARCD1Q96GM5 515 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 HSD17B10Q99714 261 aaKnown RBP2.41□□□□□ -2.02
PRKDC-205ENST00000535375 TM6SF2Q9BZW4 377 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 CHRNA10Q9GZZ6 450 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 OR51B5Q9H339 312 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 XKR8Q9H6D3 395 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 ARMC7Q9H6L4 198 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 CES1P1Q9UKY3 287 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 HYOU1Q9Y4L1 999 aa2.41□□□□□ -2.02
PRKDC-205ENST00000535375 BZW2Q9Y6E2 419 aaKnown RBP2.41□□□□□ -2.02
PRKDC-205ENST00000535375 NUP214P35658 2090 aaPredicted RBP2.41□□□□□ -2.02
PRKDC-205ENST00000535375 IGHV3-72A0A0B4J1Y9 119 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 H0YJW9 148 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 GLSO94925 669 aaPredicted RBP2.4□□□□□ -2.03
PRKDC-205ENST00000535375 VAPBO95292 243 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 PLEKHA8P1O95397 391 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 CXCL12P48061 93 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 CDK5Q00535 292 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 OR1Q1Q15612 314 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 SAXO2Q658L1 398 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 OR2T5Q6IEZ7 315 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 RTL4Q6ZR62 310 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 NDUFAF7Q7L592 441 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 WDFY1Q8IWB7 410 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 ARHGAP18Q8N392 663 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 ASCC1Q8N9N2 400 aaKnown RBP2.4□□□□□ -2.03
PRKDC-205ENST00000535375 OR4K5Q8NGD3 323 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 OR2T29Q8NH02 315 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 LILRB4Q8NHJ6 448 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 C17orf50Q8WW18 174 aa2.4□□□□□ -2.03
PRKDC-205ENST00000535375 FAM131CQ96AQ9 280 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms