RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 ZCCHC7Q8N3Z6 543 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 ANKFN1Q8N957 763 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 OR52E2Q8NGJ4 325 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 OR1J4Q8NGS1 313 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 NUBPLQ8TB37 319 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 CTNNBL1Q8WYA6 563 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 IMP4Q96G21 291 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 PAGE5Q96GU1 130 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 MYCBPQ99417 103 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 TSG101Q99816 390 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 EBNA1BP2Q99848 306 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 OR8D2Q9GZM6 311 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 EXOSC3Q9NQT5 275 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 PAK5Q9P286 719 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 GNG12Q9UBI6 72 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 RNF14Q9UBS8 474 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 PCSK1NQ9UHG2 260 aa3.32□□□□□ -1.88
ECHDC1-223ENST00000534442 TRAV9-2A0A087WT02 112 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 TRAV40A0A0B4J280 105 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 SLC17A2O00624 439 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 SS18L1O75177 396 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 CDH16O75309 829 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 SNNO75324 88 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 CBR3O75828 277 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 AQP8O94778 261 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 KBTBD11O94819 623 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 SLC35G6P0C7Q6 338 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 LAMP1P11279 417 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 RNH1P13489 461 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 FOLR2P14207 255 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 BCL3P20749 454 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 LIM2P55344 173 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 RPS15AP62244 130 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 OGDHQ02218 1023 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 COX10Q12887 443 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 ZNF154Q13106 437 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 CYP51A1Q16850 503 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 DEFB134Q4QY38 66 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 LRRC70Q7Z2Q7 622 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 SNX20Q7Z614 316 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 UBQLNLQ8IYU4 475 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 ZNF679Q8IYX0 411 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 SLC38A6Q8IZM9 456 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 RIBC1Q8N443 379 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 OR4K2Q8NGD2 314 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 BLOC1S5Q8TDH9 187 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 RASL10AQ92737 203 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 EMG1Q92979 244 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 AMDHD1Q96NU7 426 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 PEBP4Q96S96 227 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 FOLH1BQ9HBA9 442 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 RAB18Q9NP72 206 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 MMP26Q9NRE1 261 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 GLRX2Q9NS18 164 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 IMPAD1Q9NX62 359 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 SPATA7Q9P0W8 599 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 WDR45Q9Y484 360 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 PCNX3Q9H6A9 2034 aa3.31□□□□□ -1.88
ECHDC1-223ENST00000534442 NUPR2A6NF83 97 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 SH3BGRLO75368 114 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 SLC2A10O95528 541 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 IGHV2-5P01817 119 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 THY1P04216 161 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 IFNA16P05015 189 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 RHOXF2BP0C7M4 288 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 PNMA6AP0CW24 399 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 CT45A10P0DMU9 189 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 ATP5A1P25705 553 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 SHC1P29353 583 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 XIAPP98170 497 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 LRRC63Q05C16 580 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 PUDPQ08623 228 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 STK38Q15208 465 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 DPYSL2Q16555 572 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 TIGITQ495A1 244 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 LRRC23Q53EV4 343 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 TIMM23BQ5SRD1 257 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 CCDC122Q5T0U0 273 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 PVRIGQ6DKI7 326 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 ZNF470Q6ECI4 717 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 FAM71F2Q6NXP2 309 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 DCUN1D2Q6PH85 259 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 ANGPTL8Q6UXH0 198 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 ZNF600Q6ZNG1 722 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 P2RY8Q86VZ1 359 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 ZNF321PQ8N8H1 164 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 TRMT10AQ8TBZ6 339 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 TM4SF19Q96DZ7 209 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 MCEEQ96PE7 176 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 PANX2Q96RD6 677 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 PITX2Q99697 317 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 RBBP8Q99708 897 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 RHOXF2Q9BQY4 288 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 STMN4Q9H169 189 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 VCX2Q9H322 139 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 IKZF5Q9H5V7 419 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 FAM96AQ9H5X1 160 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 TIGARQ9NQ88 270 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 EHFQ9NZC4 300 aa3.3□□□□□ -1.88
ECHDC1-223ENST00000534442 ZNF581Q9P0T4 197 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms