RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 EBPQ15125 230 aaKnown RBP17.06■□□□□ 0.32
SMPD1-210ENST00000534405 C2orf76Q3KRA6 126 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 GATSQ8NAP1 163 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 OR6K6Q8NGW6 343 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 ZNF417Q8TAU3 575 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 CCDC74AQ96AQ1 378 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 GNRHR2Q96P88 292 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 ZNF385AQ96PM9 386 aaKnown RBP17.06■□□□□ 0.32
SMPD1-210ENST00000534405 NMNAT2Q9BZQ4 307 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 LOC100289279A0A1B0GTE1 492 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 KIR3DL2P43630 455 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 LBX1P52954 281 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 IGLV3-21P80748 117 aaPredicted RBP17.06■□□□□ 0.32
SMPD1-210ENST00000534405 ZNF684Q5T5D7 378 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 ARMC6Q6NXE6 501 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 DPY19L2P2Q6ZN68 376 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 ZNF563Q8TA94 476 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 SLC2A4RGQ9NR83 387 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 PRTFDC1Q9NRG1 225 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 HS3ST3B1Q9Y662 390 aa17.06■□□□□ 0.32
SMPD1-210ENST00000534405 ERCC1P07992 297 aaPredicted RBP17.05■□□□□ 0.32
SMPD1-210ENST00000534405 THEGLP0DJG4 465 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 OR5AK2Q8NH90 309 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 DGAT2Q96PD7 388 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 CACNA1IQ9P0X4 2223 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 A0A087WWC5 75 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 A0A1B0GVT2 93 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 TRGC2P03986 189 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 TRGC1P0CF51 173 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 RPS4XP62701 263 aaKnown RBP17.05■□□□□ 0.32
SMPD1-210ENST00000534405 SLC22A25Q6T423 547 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 BHLHE23Q8NDY6 225 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 OR9K2Q8NGE7 335 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 FAM3DQ96BQ1 224 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 ZNF524Q96C55 264 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 Q96M85 177 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 TSSK2Q96PF2 358 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 G6PC3Q9BUM1 346 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 OR10A5Q9H207 317 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 KCNK15Q9H427 330 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 PDE7BQ9NP56 450 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 CD207Q9UJ71 328 aa17.05■□□□□ 0.32
SMPD1-210ENST00000534405 CTSEP14091 401 aa17.04■□□□□ 0.32
SMPD1-210ENST00000534405 CHATP28329 748 aa17.04■□□□□ 0.32
SMPD1-210ENST00000534405 APLNRP35414 380 aa17.04■□□□□ 0.32
SMPD1-210ENST00000534405 ADAM8P78325 824 aa17.04■□□□□ 0.32
SMPD1-210ENST00000534405 LINC01590Q5TEZ4 76 aa17.04■□□□□ 0.32
SMPD1-210ENST00000534405 ADAD2Q8NCV1 583 aaKnown RBP17.04■□□□□ 0.32
SMPD1-210ENST00000534405 A0A087WZY1 265 aa17.04■□□□□ 0.32
SMPD1-210ENST00000534405 RAB27BO00194 218 aa17.04■□□□□ 0.32
SMPD1-210ENST00000534405 ARPC3O15145 178 aa17.04■□□□□ 0.32
SMPD1-210ENST00000534405 CLPSP04118 112 aa17.04■□□□□ 0.32
SMPD1-210ENST00000534405 CDKN2AP42771 156 aaKnown RBP17.04■□□□□ 0.32
SMPD1-210ENST00000534405 FAM3AP98173 230 aa17.04■□□□□ 0.32
SMPD1-210ENST00000534405 CD226Q15762 336 aa17.04■□□□□ 0.32
SMPD1-210ENST00000534405 ABHD5Q8WTS1 349 aa17.04■□□□□ 0.32
SMPD1-210ENST00000534405 SLC25A36Q96CQ1 311 aa17.04■□□□□ 0.32
SMPD1-210ENST00000534405 CCNL2Q96S94 520 aaPredicted RBP17.04■□□□□ 0.32
SMPD1-210ENST00000534405 KLHDC3Q9BQ90 382 aa17.04■□□□□ 0.32
SMPD1-210ENST00000534405 CYP8B1Q9UNU6 501 aa17.04■□□□□ 0.32
SMPD1-210ENST00000534405 ZNF354AO60765 605 aaPredicted RBP17.03■□□□□ 0.32
SMPD1-210ENST00000534405 GAPDHP04406 335 aaKnown RBP17.03■□□□□ 0.32
SMPD1-210ENST00000534405 CSN2P05814 226 aa17.03■□□□□ 0.32
SMPD1-210ENST00000534405 RGS19P49795 217 aa17.03■□□□□ 0.32
SMPD1-210ENST00000534405 FUT7Q11130 342 aa17.03■□□□□ 0.32
SMPD1-210ENST00000534405 ZNF595Q8IYB9 648 aa17.03■□□□□ 0.32
SMPD1-210ENST00000534405 ZNF615Q8N8J6 731 aa17.03■□□□□ 0.32
SMPD1-210ENST00000534405 ADGRG7Q96K78 797 aa17.03■□□□□ 0.32
SMPD1-210ENST00000534405 KLK13Q9UKR3 277 aa17.03■□□□□ 0.32
SMPD1-210ENST00000534405 MMP17Q9ULZ9 603 aa17.03■□□□□ 0.32
SMPD1-210ENST00000534405 SHISA7A6NL88 538 aa17.02■□□□□ 0.32
SMPD1-210ENST00000534405 RAB11BQ15907 218 aa17.02■□□□□ 0.32
SMPD1-210ENST00000534405 ZNF343Q6P1L6 599 aa17.02■□□□□ 0.32
SMPD1-210ENST00000534405 LRRC61Q9BV99 259 aa17.02■□□□□ 0.32
SMPD1-210ENST00000534405 TRIOO75962 3097 aa17.02■□□□□ 0.32
SMPD1-210ENST00000534405 RAMP1O60894 148 aa17.02■□□□□ 0.32
SMPD1-210ENST00000534405 GABRR1P24046 479 aa17.02■□□□□ 0.32
SMPD1-210ENST00000534405 THBS4P35443 961 aa17.02■□□□□ 0.32
SMPD1-210ENST00000534405 GLO1Q04760 184 aa17.02■□□□□ 0.32
SMPD1-210ENST00000534405 LEG1Q6P5S2 330 aa17.02■□□□□ 0.32
SMPD1-210ENST00000534405 CBLN3Q6UW01 205 aa17.02■□□□□ 0.32
SMPD1-210ENST00000534405 NAXEQ8NCW5 288 aa17.02■□□□□ 0.32
SMPD1-210ENST00000534405 CNTNAP3Q9BZ76 1288 aa17.02■□□□□ 0.32
SMPD1-210ENST00000534405 FRRS1LQ9P0K9 344 aa17.02■□□□□ 0.32
SMPD1-210ENST00000534405 PUS1Q9Y606 427 aaKnown RBP eCLIP17.02■□□□□ 0.32
SMPD1-210ENST00000534405 ALPK2Q86TB3 2170 aa17.02■□□□□ 0.31
SMPD1-210ENST00000534405 TMEM131Q92545 1883 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 ZNF727A8MUV8 499 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 STK17BO94768 372 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 ZNF432O94892 652 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 AKR1C4P17516 323 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 ERVFRD-1P60508 538 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 EIF2B1Q14232 305 aaKnown RBP17.01■□□□□ 0.31
SMPD1-210ENST00000534405 KIAA0895LQ68EN5 471 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 MED25Q71SY5 747 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 ZNF321PQ8N8H1 164 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 FRZBQ92765 325 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 ALG12Q9BV10 488 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 GPR27Q9NS67 375 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 FAM212BQ9NTI7 297 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms