RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 TRBV6-6A0A0A6YYG2 114 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 GLYATL1P3A0A0U1RQE8 302 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 LOC285095A0A1B0GVY8 99 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 GPR89AB7ZAQ6 455 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 DNAJB6O75190 326 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 GPR89BP0CG08 455 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 MAGP20916 626 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 PSMB5P28074 263 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 DEKP35659 375 aaKnown RBP4.03□□□□□ -1.76
CASP4-213ENST00000534356 VDAC2P45880 294 aaPredicted RBP4.03□□□□□ -1.76
CASP4-213ENST00000534356 LHX2P50458 406 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 DLX1P56177 255 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 DYNLT1P63172 113 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 TFF3Q07654 80 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 PPIDQ08752 370 aaKnown RBP4.03□□□□□ -1.76
CASP4-213ENST00000534356 KCTD19Q17RG1 926 aaPredicted RBP4.03□□□□□ -1.76
CASP4-213ENST00000534356 MAJINQ3KP22 176 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 CCSMST1Q4G0I0 132 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 CCDC183Q5T5S1 534 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 FRMPD2BQ6IN97 320 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 SLC26A11Q86WA9 606 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 PSTKQ8IV42 348 aaKnown RBP4.03□□□□□ -1.76
CASP4-213ENST00000534356 OR4K2Q8NGD2 314 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 OR13C4Q8NGS5 318 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 OR9G1Q8NH87 305 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 MAIP1Q8WWC4 291 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 TFGQ92734 400 aaPredicted RBP4.03□□□□□ -1.76
CASP4-213ENST00000534356 RNF2Q99496 336 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 OR11A1Q9GZK7 315 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 REEP4Q9H6H4 257 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 FANCEQ9HB96 536 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 SMOXQ9NWM0 555 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 STMN3Q9NZ72 180 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 C3orf18Q9UK00 162 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 RPL36Q9Y3U8 105 aaKnown RBP4.03□□□□□ -1.76
CASP4-213ENST00000534356 CUBNO60494 3623 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 NCKAP5O14513 1909 aa4.03□□□□□ -1.76
CASP4-213ENST00000534356 PRR14LQ5THK1 2151 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 NSG1A0A0A6YYJ2 146 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 TRAV17A0A0B4J275 112 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 OR51F1A6NGY5 319 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 C2orf74A8MZ97 194 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 AGPAT2O15120 278 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 RTL8CO15255 209 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 ATP5LO75964 103 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 GIPP09681 153 aaPredicted RBP4.02□□□□□ -1.77
CASP4-213ENST00000534356 ICAM2P13598 275 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 ZNF32P17041 273 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 PCMT1P22061 227 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 KDELR1P24390 212 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 SPAM1P38567 509 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 DDOSTP39656 456 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 EFNB2P52799 333 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 SH3BGRP55822 239 aaPredicted RBP4.02□□□□□ -1.77
CASP4-213ENST00000534356 VSX2P58304 361 aaPredicted RBP4.02□□□□□ -1.77
CASP4-213ENST00000534356 SAMD4BQ5PRF9 694 aaKnown RBP4.02□□□□□ -1.77
CASP4-213ENST00000534356 AGBL2Q5U5Z8 902 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 PDPK2PQ6A1A2 396 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 CTRB2Q6GPI1 263 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 OR52E8Q6IFG1 317 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 Q6ZPB1 254 aaPredicted RBP4.02□□□□□ -1.77
CASP4-213ENST00000534356 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 PGAP1Q75T13 922 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 VSTM4Q8IW00 320 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 PIANPQ8IYJ0 282 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 FANK1Q8TC84 345 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 LKAAEAR1Q8TD35 194 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 ANP32BQ92688 251 aaKnown RBP4.02□□□□□ -1.77
CASP4-213ENST00000534356 N4BP2L2Q92802 583 aaPredicted RBP4.02□□□□□ -1.77
CASP4-213ENST00000534356 IP6K3Q96PC2 410 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 RNF157Q96PX1 679 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 OR2M2Q96R28 347 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 RNF167Q9H6Y7 350 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 THUMPD1Q9NXG2 353 aaKnown RBP4.02□□□□□ -1.77
CASP4-213ENST00000534356 C6orf203Q9P0P8 240 aaPredicted RBP4.02□□□□□ -1.77
CASP4-213ENST00000534356 MRPS7Q9Y2R9 242 aaKnown RBP4.02□□□□□ -1.77
CASP4-213ENST00000534356 WSB1Q9Y6I7 421 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 ROS1P08922 2347 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 NINQ8N4C6 2090 aa4.02□□□□□ -1.77
CASP4-213ENST00000534356 A0A087X0T9 212 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 IGHV1-45A0A0A0MS14 117 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 A0A0J9YY10 115 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 A0A1B0GX78 115 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 IQCF5A8MTL0 148 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 OR1I1O60431 355 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 SRP72O76094 671 aaKnown RBP4.01□□□□□ -1.77
CASP4-213ENST00000534356 DIRAS1O95057 198 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 SERPINA7P05543 415 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 FAM228BP0C875 321 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 ATP1B2P14415 290 aaPredicted RBP4.01□□□□□ -1.77
CASP4-213ENST00000534356 NSG1P42857 185 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 GLP1RP43220 463 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 PRLHRP49683 370 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 HNMTP50135 292 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 EMP2P54851 167 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 PIGHQ14442 188 aaPredicted RBP4.01□□□□□ -1.77
CASP4-213ENST00000534356 ATP6AP1Q15904 470 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 MICBQ29980 383 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 C6orf89Q6UWU4 347 aa4.01□□□□□ -1.77
CASP4-213ENST00000534356 HSDL2Q6YN16 418 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms