RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 RHBDL1O75783 438 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 OR7A10O76100 309 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 ARG1P05089 322 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 ALDOCP09972 364 aaKnown RBP5.08□□□□□ -1.6
CD44-237ENST00000534082 FUT1P19526 365 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 IL12AP29459 219 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 GRK5P34947 590 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 OR3A4PP47883 348 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 GMFBP60983 142 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 RPL27P61353 136 aaKnown RBP5.08□□□□□ -1.6
CD44-237ENST00000534082 LCN6P62502 163 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 CSNK2BP67870 215 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 DEFB136Q30KP8 78 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 ALG10Q5BKT4 473 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 ENTPD8Q5MY95 495 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 LDLRAD2Q5SZI1 272 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 FAM27D1Q5T7N8 215 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 C8orf74Q6P047 294 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 PLBD1Q6P4A8 553 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 WDR82Q6UXN9 313 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 ZNF782Q6ZMW2 699 aaPredicted RBP5.08□□□□□ -1.6
CD44-237ENST00000534082 ZNF788Q6ZQV5 615 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 C16orf82Q7Z2V1 217 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 WDR86Q86TI4 376 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 ZNF695Q8IW36 515 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 C11orf42Q8N5U0 333 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 PFN4Q8NHR9 129 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 BCAS4Q8TDM0 211 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 MALSU1Q96EH3 234 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 RNFT2Q96EX2 444 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 MED30Q96HR3 178 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 ITCHQ96J02 903 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 MPP4Q96JB8 637 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 COQ7Q99807 217 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 HDHD2Q9H0R4 259 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 DNTTIP1Q9H147 329 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 C19orf12Q9NSK7 152 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 SNTG1Q9NSN8 517 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 C14orf119Q9NWQ9 140 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 VNN3Q9NY84 501 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 HAO2Q9NYQ3 351 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 MRPL15Q9P015 296 aaKnown RBP5.08□□□□□ -1.6
CD44-237ENST00000534082 KCNG2Q9UJ96 466 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 DNAH17Q9UFH2 4485 aa5.08□□□□□ -1.6
CD44-237ENST00000534082 TRAPPC13A5PLN9 417 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 A6NIZ1 184 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 FAM90A22PA8MWA6 464 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 ODF3BA8MYP8 253 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 H3BUI4 141 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 MT-ND1P03886 318 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 IFNA6P05013 189 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 TSPAN19P0C672 248 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 ZCCHC18P0CG32 403 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 PGA5P0DJD9 388 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 MED14OSP0DP75 135 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 CTLA4P16410 223 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 AQP1P29972 269 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 ENTPD1P49961 510 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 SLC25A1P53007 311 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 OR12D2P58182 307 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 RAP1BP61224 184 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 RAP1AP62834 184 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 SLC34A1Q06495 639 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 MZT1Q08AG7 82 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 RGNQ15493 299 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 C9orf152Q5JTZ5 239 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 REEP3Q6NUK4 255 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 DPY19L4Q7Z388 723 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 C11orf53Q8IXP5 236 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 C4orf33Q8N1A6 199 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 TMEM185AQ8NFB2 350 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 OR6T1Q8NGN1 323 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 OR8U1Q8NH10 309 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 SGTBQ96EQ0 304 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 ZBTB18Q99592 522 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 PRSS27Q9BQR3 290 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 KRTAP4-5Q9BYR2 181 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 EVA1AQ9H8M9 152 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 GRPEL1Q9HAV7 217 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 AIG1Q9NVV5 245 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 POLR1DQ9Y2S0 133 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 LRP12Q9Y561 859 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 HILPDAQ9Y5L2 63 aa5.07□□□□□ -1.6
CD44-237ENST00000534082 TEX13CA0A0J9YWL9 993 aa5.06□□□□□ -1.6
CD44-237ENST00000534082 hCG_1809904A0A1W2PP81 198 aa5.06□□□□□ -1.6
CD44-237ENST00000534082 A0A1W2PPE2 198 aa5.06□□□□□ -1.6
CD44-237ENST00000534082 A0A1W2PPH5 198 aa5.06□□□□□ -1.6
CD44-237ENST00000534082 A0A1W2PR64 198 aa5.06□□□□□ -1.6
CD44-237ENST00000534082 A0A1W2PRV1 198 aa5.06□□□□□ -1.6
CD44-237ENST00000534082 GGT3PA6NGU5 568 aa5.06□□□□□ -1.6
CD44-237ENST00000534082 BHLHE40O14503 412 aa5.06□□□□□ -1.6
CD44-237ENST00000534082 RIPK2O43353 540 aa5.06□□□□□ -1.6
CD44-237ENST00000534082 LCATP04180 440 aa5.06□□□□□ -1.6
CD44-237ENST00000534082 AMY1AP04745 511 aa5.06□□□□□ -1.6
CD44-237ENST00000534082 AMY2AP04746 511 aa5.06□□□□□ -1.6
CD44-237ENST00000534082 VIMP08670 466 aaKnown RBP5.06□□□□□ -1.6
CD44-237ENST00000534082 ACSM4P0C7M7 580 aa5.06□□□□□ -1.6
CD44-237ENST00000534082 CCL3L1P16619 93 aa5.06□□□□□ -1.6
CD44-237ENST00000534082 LBPP18428 481 aa5.06□□□□□ -1.6
CD44-237ENST00000534082 NAT1P18440 290 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms