RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 OR4K17Q8NGC6 315 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 OR10S1Q8NGN2 331 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 GGACTQ9BVM4 153 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 FAM117AQ9C073 453 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 FAM206AQ9NX38 181 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 RHBDD3Q9Y3P4 386 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 LOC390937A0A1W2PQ73 354 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 SHISA7A6NL88 538 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 SLC25A4P12235 298 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 PSMB6P28072 239 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 GALNTL5Q7Z4T8 443 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 NKAIN3Q8N8D7 197 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 OR5AP2Q8NGF4 316 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 KCNK17Q96T54 332 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 GPER1Q99527 375 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 GSKIPQ9P0R6 139 aa17.14■□□□□ 0.33
CAPN1-226ENST00000533820 MSGN1A6NI15 193 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 METTL12A8MUP2 240 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 ACTL6AO96019 429 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 TSPAN7P41732 249 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 CLDN6P56747 220 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 CFHR1Q03591 330 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 NCMAPQ5T1S8 102 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 LPCAT3Q6P1A2 487 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 DNM1P34Q6PK57 102 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 OR10R2Q8NGX6 335 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 S100PBPQ96BU1 408 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 POM121Q96HA1 1249 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 ST6GALNAC5Q9BVH7 336 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 PPP1R14DQ9NXH3 145 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 A0A1W2PNR3 127 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 A0A1W2PQD3 144 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 ISG15P05161 165 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 GIMD1P0DJR0 217 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 NME1P15531 152 aaKnown RBP17.13■□□□□ 0.33
CAPN1-226ENST00000533820 ZNF44P15621 663 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 HSD11B1P28845 292 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 AKR1C3P42330 323 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 CSNK1EP49674 416 aaKnown RBP17.13■□□□□ 0.33
CAPN1-226ENST00000533820 HSD11B2P80365 405 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 ZNF345Q14585 488 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 TGIF2LXQ8IUE1 241 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 ZNF383Q8NA42 475 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 OR5D14Q8NGL3 314 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 RNF133Q8WVZ7 376 aa17.13■□□□□ 0.33
CAPN1-226ENST00000533820 UNKLQ9H9P5 680 aaKnown RBP17.13■□□□□ 0.33
CAPN1-226ENST00000533820 A0A0A6YYD4 124 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 LILRA5A6NI73 299 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 C2CD4DB7Z1M9 353 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 CRHP06850 196 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 HCKP08631 526 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 LYPD6Q86Y78 171 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 TSTD1Q8NFU3 115 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 SLAMF9Q96A28 289 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 TCEAL7Q9BRU2 100 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 TREM1Q9NP99 234 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 GPR27Q9NS67 375 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 AIMP2Q13155 320 aaKnown RBP17.12■□□□□ 0.33
CAPN1-226ENST00000533820 TDGQ13569 410 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 ARFRP1Q13795 201 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 TGIF1Q15583 401 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 ZNF319Q9P2F9 582 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 MRPS28Q9Y2Q9 187 aaKnown RBP17.12■□□□□ 0.33
CAPN1-226ENST00000533820 FAM96BQ9Y3D0 163 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 A6NIZ1 184 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 H0YIZ8 118 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 RER1O15258 196 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 NUDT21O43809 227 aaKnown RBP17.12■□□□□ 0.33
CAPN1-226ENST00000533820 DAP3P51398 398 aaKnown RBP17.12■□□□□ 0.33
CAPN1-226ENST00000533820 RAP1BP61224 184 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 RAP1AP62834 184 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 RPP30P78346 268 aaKnown RBP17.12■□□□□ 0.33
CAPN1-226ENST00000533820 PLAC9Q5JTB6 97 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 NKAPLQ5M9Q1 402 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 FAM69BQ5VUD6 431 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 TMEM234Q8WY98 164 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 KLRF1Q9NZS2 232 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 CBY1Q9Y3M2 126 aa17.12■□□□□ 0.33
CAPN1-226ENST00000533820 AGPAT2O15120 278 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 CRTAPO75718 401 aaPredicted RBP17.11■□□□□ 0.33
CAPN1-226ENST00000533820 KLK2P20151 261 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 MMP16P51512 607 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 RAB2AP61019 212 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 RIPPLY1Q0D2K3 151 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 ZSCAN4Q8NAM6 433 aaPredicted RBP17.11■□□□□ 0.33
CAPN1-226ENST00000533820 MYOZ1Q9NP98 299 aaPredicted RBP17.11■□□□□ 0.33
CAPN1-226ENST00000533820 A0A0A6YYH2 397 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 A6NJ64 397 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 RAD51DO75771 328 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 LTBRP36941 435 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 LBX1P52954 281 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 QRFPP83859 136 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 PEA15Q15121 130 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 OR51F2Q8NH61 342 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 ASB13Q8WXK3 278 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 RAB3CQ96E17 227 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 HRH4Q9H3N8 390 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 PIGMQ9H3S5 423 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 CHST11Q9NPF2 352 aa17.11■□□□□ 0.33
CAPN1-226ENST00000533820 FGF21Q9NSA1 209 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms