RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 ELF3P78545 371 aaPredicted RBP1.1□□□□□ -2.23
ATM-220ENST00000533526 HMGN5P82970 282 aaKnown RBP1.1□□□□□ -2.23
ATM-220ENST00000533526 LRRC66Q68CR7 880 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 MORN3Q6PF18 240 aaPredicted RBP1.1□□□□□ -2.23
ATM-220ENST00000533526 WDR82Q6UXN9 313 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 LINC00336Q6ZUF6 198 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 SSX9Q7RTT3 188 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 VKORC1L1Q8N0U8 176 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 LINC00469Q8N7U9 141 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 OR4M2Q8NGB6 313 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 OR10W1Q8NGF6 305 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 YIPF5Q969M3 257 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 MCUR1Q96AQ8 359 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 MRPL48Q96GC5 212 aaKnown RBP1.1□□□□□ -2.23
ATM-220ENST00000533526 STACQ99469 402 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 CCDC77Q9BR77 488 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 UCK2Q9BZX2 261 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 TMEM185BQ9H7F4 350 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 PLEKHF2Q9H8W4 249 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 TRIM45Q9H8W5 580 aaPredicted RBP1.1□□□□□ -2.23
ATM-220ENST00000533526 TREX1Q9NSU2 369 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 ASF1BQ9NVP2 202 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 DCAF16Q9NXF7 216 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 ZNF492Q9P255 531 aa1.1□□□□□ -2.23
ATM-220ENST00000533526 RCL1Q9Y2P8 373 aaKnown RBP1.1□□□□□ -2.23
ATM-220ENST00000533526 SAMHD1Q9Y3Z3 626 aaKnown RBP1.1□□□□□ -2.23
ATM-220ENST00000533526 RPRD2Q5VT52 1461 aaKnown RBP1.1□□□□□ -2.23
ATM-220ENST00000533526 FBN1P35555 2871 aaKnown RBP1.1□□□□□ -2.23
ATM-220ENST00000533526 KCNE1BA0A087WTH5 132 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 A0A0A6YYD5 115 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 ARPC4-TTLL3A0A0A6YYG9 625 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 D6RAR5 112 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 MYL12BO14950 172 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 CACNG3O60359 315 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 SLC16A7O60669 478 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 TRBV12-3P01733 135 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 IGHV1-46P01743 117 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 HLA-HP01893 362 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 STOMP27105 288 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 BMI1P35226 326 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 ACOT2P49753 483 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 MERTKQ12866 999 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 TRDNQ13061 729 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 IDI1Q13907 227 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 MAPRE2Q15555 327 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 PYDC2Q56P42 97 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 CPTPQ5TA50 214 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 PRAMEF20Q5VT98 475 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 FAM104BQ5XKR9 115 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 AMMECR1LQ6DCA0 310 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 TCF24Q7RTU0 167 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 LUZP2Q86TE4 346 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 CDH26Q8IXH8 852 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 GABRG1Q8N1C3 465 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 OR1S1Q8NH92 325 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 TSEN15Q8WW01 171 aaKnown RBP1.09□□□□□ -2.23
ATM-220ENST00000533526 RCN3Q96D15 328 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 SNF8Q96H20 258 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 ABCG5Q9H222 651 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 BEX1Q9HBH7 125 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 ACP6Q9NPH0 428 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 INIPQ9NRY2 104 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 SLC22A7Q9Y694 548 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 COMMD3-BMI1R4GMX3 469 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 R4GN34 69 aa1.09□□□□□ -2.23
ATM-220ENST00000533526 TSPOAP1O95153 1857 aa1.09□□□□□ -2.24
ATM-220ENST00000533526 UBN2Q6ZU65 1347 aa1.09□□□□□ -2.24
ATM-220ENST00000533526 JCADQ9P266 1359 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 ITGB4P16144 1822 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 SPATA31E1Q6ZUB1 1445 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 GOLGA8JA6NMD2 632 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 E7EQL1 145 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 CLDN34H7C241 214 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 ERI3O43414 337 aaKnown RBP1.08□□□□□ -2.24
ATM-220ENST00000533526 GOLGA8HP0CJ92 632 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 RPS15P62841 145 aaKnown RBP1.08□□□□□ -2.24
ATM-220ENST00000533526 TRMT5Q32P41 509 aaKnown RBP1.08□□□□□ -2.24
ATM-220ENST00000533526 C6orf99Q4VX62 202 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 SPANXN2Q5MJ10 180 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 MRPL2Q5T653 305 aaKnown RBP1.08□□□□□ -2.24
ATM-220ENST00000533526 TWF2Q6IBS0 349 aaKnown RBP1.08□□□□□ -2.24
ATM-220ENST00000533526 SPNS3Q6ZMD2 512 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 UNC93AQ86WB7 457 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 BBS7Q8IWZ6 715 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 ZNF420Q8TAQ5 688 aaPredicted RBP1.08□□□□□ -2.24
ATM-220ENST00000533526 ASZ1Q8WWH4 475 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 RAB1CQ92928 201 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 JSRP1Q96MG2 331 aaPredicted RBP1.08□□□□□ -2.24
ATM-220ENST00000533526 UQCC2Q9BRT2 126 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 TBL1XR1Q9BZK7 514 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 FAM192AQ9GZU8 254 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 FANCEQ9HB96 536 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 C20orf96Q9NUD7 363 aaPredicted RBP1.08□□□□□ -2.24
ATM-220ENST00000533526 RAB22AQ9UL26 194 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 SIGLEC1Q9BZZ2 1709 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 THADAQ6YHU6 1953 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 KIAA1671Q9BY89 1806 aa1.08□□□□□ -2.24
ATM-220ENST00000533526 SSH2Q76I76 1423 aa1.07□□□□□ -2.24
ATM-220ENST00000533526 BAZ2AQ9UIF9 1905 aaKnown RBP1.07□□□□□ -2.24
ATM-220ENST00000533526 CCL15-CCL14A0A0B4J2E2 113 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms