RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 UFSP2Q9NUQ7 469 aa17.17■□□□□ 0.34
CCS-208ENST00000533244 C14orf119Q9NWQ9 140 aa17.17■□□□□ 0.34
CCS-208ENST00000533244 EXOGQ9Y2C4 368 aaKnown RBP17.17■□□□□ 0.34
CCS-208ENST00000533244 MPC1Q9Y5U8 109 aa17.17■□□□□ 0.34
CCS-208ENST00000533244 METTL15A6NJ78 407 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 F5H0A9 414 aaPredicted RBP17.16■□□□□ 0.34
CCS-208ENST00000533244 ACTC1P68032 377 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 ACTA1P68133 377 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 KRTAP21-3Q3LHN1 58 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 OGFRL1Q5TC84 451 aaPredicted RBP17.16■□□□□ 0.34
CCS-208ENST00000533244 LIPNQ5VXI9 398 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 Q6ZSR3 168 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 GLCCI1Q86VQ1 547 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 MUC20Q8N307 709 aaPredicted RBP17.16■□□□□ 0.34
CCS-208ENST00000533244 YIPF7Q8N8F6 280 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 OR11L1Q8NGX0 322 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 OR8S1Q8NH09 359 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 APH1BQ8WW43 257 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 TMEM186Q96B77 213 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 Q96MT0 163 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 TMEM165Q9HC07 324 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 ABCB9Q9NP78 766 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 LPAR3Q9UBY5 353 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 OR52A1Q9UKL2 312 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 SNX5Q9Y5X3 404 aa17.16■□□□□ 0.34
CCS-208ENST00000533244 DBTP11182 482 aaKnown RBP17.15■□□□□ 0.34
CCS-208ENST00000533244 GNALP38405 381 aa17.15■□□□□ 0.34
CCS-208ENST00000533244 MAP2K3P46734 347 aa17.15■□□□□ 0.34
CCS-208ENST00000533244 ELF3P78545 371 aaPredicted RBP17.15■□□□□ 0.34
CCS-208ENST00000533244 IL5RAQ01344 420 aa17.15■□□□□ 0.34
CCS-208ENST00000533244 PRDX4Q13162 271 aa17.15■□□□□ 0.34
CCS-208ENST00000533244 CR1LQ2VPA4 569 aa17.15■□□□□ 0.34
CCS-208ENST00000533244 CHRFAM7AQ494W8 412 aa17.15■□□□□ 0.34
CCS-208ENST00000533244 BCL2L15Q5TBC7 163 aa17.15■□□□□ 0.34
CCS-208ENST00000533244 KLHL36Q8N4N3 616 aa17.15■□□□□ 0.34
CCS-208ENST00000533244 ZNF555Q8NEP9 628 aa17.15■□□□□ 0.34
CCS-208ENST00000533244 RORBQ92753 470 aa17.15■□□□□ 0.34
CCS-208ENST00000533244 RNF166Q96A37 237 aaPredicted RBP17.15■□□□□ 0.34
CCS-208ENST00000533244 LGALS12Q96DT0 336 aa17.15■□□□□ 0.34
CCS-208ENST00000533244 TLNRD1Q9H1K6 362 aa17.15■□□□□ 0.34
CCS-208ENST00000533244 LPAR2Q9HBW0 351 aa17.15■□□□□ 0.34
CCS-208ENST00000533244 UBAP1Q9NZ09 502 aa17.15■□□□□ 0.34
CCS-208ENST00000533244 RNF7Q9UBF6 113 aa17.15■□□□□ 0.34
CCS-208ENST00000533244 PPIAL4EA0A075B759 164 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 TRAV20A0A0B4J274 112 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 ZNF816-ZNF321PA0A0X1KG74 233 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 A0A1B0GTI1 187 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 PPIAL4DF5H284 164 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 PLPP2O43688 288 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 PPIAL4FP0DN26 164 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 IRF2P14316 349 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 ZNF404Q494X3 552 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 CDONQ4KMG0 1287 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 FAM201AQ5SY85 155 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 FAM120AOSQ5T036 256 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 ZBTB37Q5TC79 503 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 CATSPERDQ86XM0 798 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 C11orf53Q8IXP5 236 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 HPSE2Q8WWQ2 592 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 OR5P3Q8WZ94 311 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 FGF23Q9GZV9 251 aaPredicted RBP17.14■□□□□ 0.33
CCS-208ENST00000533244 DCLRE1BQ9H816 532 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 MRPS18AQ9NVS2 196 aaKnown RBP17.14■□□□□ 0.33
CCS-208ENST00000533244 HIF1ANQ9NWT6 349 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 PPIAL4AQ9Y536 164 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 PCDHGB1Q9Y5G3 927 aa17.14■□□□□ 0.33
CCS-208ENST00000533244 ZNF850A8MQ14 1090 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 CEACAM18A8MTB9 384 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 WBP4O75554 376 aaKnown RBP17.13■□□□□ 0.33
CCS-208ENST00000533244 DHRS3O75911 302 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 RPP14O95059 124 aaKnown RBP17.13■□□□□ 0.33
CCS-208ENST00000533244 ZNF205O95201 554 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 GRPP07492 148 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 PCMT1P22061 227 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 CCL1P22362 96 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 CPT2P23786 658 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 ADARB1P78563 741 aaKnown RBP17.13■□□□□ 0.33
CCS-208ENST00000533244 ZNF154Q13106 437 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 ZNF691Q5VV52 312 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 ACBD7Q8N6N7 88 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 SEMA6DQ8NFY4 1073 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 OR1M1Q8NGA1 313 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 FAM71F1Q96KD3 344 aaPredicted RBP17.13■□□□□ 0.33
CCS-208ENST00000533244 MICU1Q9BPX6 476 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 TMEM246Q9BRR3 403 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 SHARPINQ9H0F6 387 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 C1orf123Q9NWV4 160 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 GTF2A1LQ9UNN4 478 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 SLC22A13Q9Y226 551 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 ANXA2P2A6NMY6 339 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 A8MXK9 166 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 IGHA1P01876 353 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 RIPPLY1Q0D2K3 151 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 TP53I3Q53FA7 332 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 FAM76BQ5HYJ3 339 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 TTC23Q5W5X9 447 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 ZNF826PQ6ZT77 177 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 ZNF771Q7L3S4 317 aaPredicted RBP17.13■□□□□ 0.33
CCS-208ENST00000533244 KCTD20Q7Z5Y7 419 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 COMMD2Q86X83 199 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms