RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ADRA2CP18825 462 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 NR4A1P22736 598 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 GATA3P23771 443 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 GADD45AP24522 165 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 OPRL1P41146 370 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 TGM4P49221 684 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 TMBIM6P55061 237 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 SH3BGRP55822 239 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 TAS2R43P59537 309 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 UBE2NP61088 152 aaKnown RBP9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 PCBD1P61457 104 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 SLC3A1Q07837 685 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 MRPL28Q13084 256 aaKnown RBP9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 AQP6Q13520 282 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 GPR50Q13585 617 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 TAF13Q15543 124 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 CCDC58Q4VC31 144 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 HIKESHIQ53FT3 197 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 ELFN2Q5R3F8 820 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 DMKNQ6E0U4 476 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 ARL9Q6T311 187 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 SLC16A14Q7RTX9 510 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 SYT9Q86SS6 491 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 SIGLECL1Q8N7X8 197 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 OR1K1Q8NGR3 316 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 C22orf15Q8WYQ4 148 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 TMEM203Q969S6 136 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 SLC25A28Q96A46 364 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 WACQ9BTA9 647 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 OR51E2Q9H255 320 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 TPK1Q9H3S4 243 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 MS4A5Q9H3V2 200 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 PNRC2Q9NPJ4 139 aaKnown RBP9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 CRNNQ9UBG3 495 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 ENPP5Q9UJA9 477 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 SF3B6Q9Y3B4 125 aaKnown RBP9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 LRP12Q9Y561 859 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 TIMM10BQ9Y5J6 103 aa9.6□□□□□ -0.87
TRAPPC4-213ENST00000533149 TRBV2A0A0J9YWF9 115 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 DNAJC9-AS1A6NH13 148 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 WNT9BO14905 357 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 PPIHO43447 177 aaKnown RBP9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 PLPP2O43688 288 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 AIREO43918 545 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 RNASE1P07998 156 aaKnown RBP9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 CECR9P0C854 216 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 ZNF32P17041 273 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 COL8A2P25067 703 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 NANOS3P60323 173 aaKnown RBP9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 RPS25P62851 125 aaKnown RBP9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 MRPS11P82912 194 aaKnown RBP9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 PSG4Q00888 419 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 HGFACQ04756 655 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 SCRN3Q0VDG4 424 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 ALKBH1Q13686 389 aaKnown RBP9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 TBRG1Q3YBR2 411 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 DCAF12L2Q5VW00 463 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 FDX2Q6P4F2 183 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 SLC16A12Q6ZSM3 486 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 RHOUQ7L0Q8 258 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 DOK3Q7L591 496 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 FAM169BQ8N8A8 192 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 OR2G2Q8NGZ5 317 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 AKR7LQ8NHP1 331 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 ZNF420Q8TAQ5 688 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 HAVCR2Q8TDQ0 301 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 GHSRQ92847 366 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 RPL3LQ92901 407 aaKnown RBP9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 DVL3Q92997 716 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 PPP1R14AQ96A00 147 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 ISOC1Q96CN7 298 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 RAB39BQ96DA2 213 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 C1QTNF5Q9BXJ0 243 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 OR2H1Q9GZK4 316 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 C7orf69Q9H7B7 122 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 RNF121Q9H920 327 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 NDUFB11Q9NX14 153 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 RSL24D1Q9UHA3 163 aaKnown RBP9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 FBXL3Q9UKT7 428 aa9.59□□□□□ -0.87
TRAPPC4-213ENST00000533149 NBEAL2Q6ZNJ1 2754 aa9.59□□□□□ -0.88
TRAPPC4-213ENST00000533149 ARPC4-TTLL3A0A0A6YYG9 625 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF878C9JN71 531 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 M0R233 179 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 TIMM23O14925 209 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 SGCEO43556 437 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 SYNGR3O43761 229 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 NOL3O60936 208 aaKnown RBP9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 GPX5O75715 221 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 FSHBP01225 129 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 IGLV1-44P01699 117 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 HLA-HP01893 362 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 CD1AP06126 327 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 MMP7P09237 267 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 CD79AP11912 226 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 PSMA1P25786 263 aaKnown RBP9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 CALCRP30988 508 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 DCTDP32321 178 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 CRYBB2P43320 205 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 EVX1P49640 407 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 GDI2P50395 445 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms