RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 CLPTM1LQ96KA5 538 aa7.3□□□□□ -1.24
USF1-210ENST00000531842 GPX7Q96SL4 187 aaPredicted RBP7.3□□□□□ -1.24
USF1-210ENST00000531842 NMNAT3Q96T66 252 aa7.3□□□□□ -1.24
USF1-210ENST00000531842 SSX3Q99909 188 aa7.3□□□□□ -1.24
USF1-210ENST00000531842 IFT27Q9BW83 186 aa7.3□□□□□ -1.24
USF1-210ENST00000531842 FN3KQ9H479 309 aa7.3□□□□□ -1.24
USF1-210ENST00000531842 FN3KRPQ9HA64 309 aa7.3□□□□□ -1.24
USF1-210ENST00000531842 N6AMT1Q9Y5N5 214 aa7.3□□□□□ -1.24
USF1-210ENST00000531842 BIRC6Q9NR09 4857 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 A0A1B0GVI7 797 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 CD300LBA8K4G0 201 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 TXNDC12O95881 172 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 PAHP00439 452 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 ZNF823P16415 610 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 HOXD3P31249 432 aaPredicted RBP7.29□□□□□ -1.24
USF1-210ENST00000531842 SLC6A6P31641 620 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 GGT2P36268 569 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 MAGEA2P43356 314 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 KIR2DS4P43632 304 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 RAB13P51153 203 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 TPTEP56180 551 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 SMIM11AP58511 58 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 TRAP1Q12931 704 aaKnown RBP7.29□□□□□ -1.24
USF1-210ENST00000531842 KCNJ8Q15842 424 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 RFX4Q33E94 735 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 KRTAP27-1Q3LI81 207 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 SAMD4BQ5PRF9 694 aaKnown RBP7.29□□□□□ -1.24
USF1-210ENST00000531842 GLYATL3Q5SZD4 288 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 LYPD4Q6UWN0 246 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 CYP2R1Q6VVX0 501 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 MRPL21Q7Z2W9 205 aaKnown RBP7.29□□□□□ -1.24
USF1-210ENST00000531842 OR6V1Q8N148 313 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 GALNT4Q8N4A0 578 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 LINC00471Q8N535 108 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 CCDC197Q8NCU1 140 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 FANK1Q8TC84 345 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 SPTSSAQ969W0 71 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 ERGIC1Q969X5 290 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 SLC7A6OSQ96CW6 309 aaPredicted RBP7.29□□□□□ -1.24
USF1-210ENST00000531842 ATF6BQ99941 703 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 ZNF702PQ9H963 129 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 RPRD1BQ9NQG5 326 aaKnown RBP7.29□□□□□ -1.24
USF1-210ENST00000531842 SNTG1Q9NSN8 517 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 SERTAD4Q9NUC0 356 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 VNN3Q9NY84 501 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 TAS2R1Q9NYW7 299 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 SAMD4AQ9UPU9 718 aaKnown RBP7.29□□□□□ -1.24
USF1-210ENST00000531842 NOP16Q9Y3C1 178 aaKnown RBP7.29□□□□□ -1.24
USF1-210ENST00000531842 KPTNQ9Y664 436 aa7.29□□□□□ -1.24
USF1-210ENST00000531842 DNAH7Q8WXX0 4024 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 IGLV1-36A0A0B4J1U3 117 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 TRAV38-1A0A0B4J264 116 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 GGT3PA6NGU5 568 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 FBXO24O75426 580 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 LHBP01229 141 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 SLC2A1P11166 492 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 HIST1H1CP16403 213 aaKnown RBP7.28□□□□□ -1.24
USF1-210ENST00000531842 JUNBP17275 347 aaPredicted RBP7.28□□□□□ -1.24
USF1-210ENST00000531842 IFNGR2P38484 337 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 SPIBQ01892 262 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 PPP1R8Q12972 351 aaKnown RBP7.28□□□□□ -1.24
USF1-210ENST00000531842 TAF13Q15543 124 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 SLC35F1Q5T1Q4 408 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 ZNF770Q6IQ21 691 aaPredicted RBP7.28□□□□□ -1.24
USF1-210ENST00000531842 SLC18B1Q6NT16 456 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 PGBD2Q6P3X8 592 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 C16orf89Q6UX73 402 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 TMEM219Q86XT9 240 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 DYNAPQ8N1N2 210 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 CELF2-AS1Q8N7Q2 184 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 SLC26A10Q8NG04 563 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 OR4C15Q8NGM1 316 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 OR4C13Q8NGP0 309 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 OR2T6Q8NHC8 308 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 PIFOQ8TCI5 191 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 LRRC29Q8WV35 223 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 MCUR1Q96AQ8 359 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 NSMCE2Q96MF7 247 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 SLC22A4Q9H015 551 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 WDR13Q9H1Z4 485 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 OR52D1Q9H346 318 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 IL1RAPQ9NPH3 570 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 PNRC2Q9NPJ4 139 aaKnown RBP7.28□□□□□ -1.24
USF1-210ENST00000531842 TRIM36Q9NQ86 728 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 ACTR3BQ9P1U1 418 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 MAGEL2Q9UJ55 1249 aa7.28□□□□□ -1.24
USF1-210ENST00000531842 PRPF19Q9UMS4 504 aaKnown RBP7.28□□□□□ -1.24
USF1-210ENST00000531842 M0R135 149 aa7.27□□□□□ -1.25
USF1-210ENST00000531842 ARPC3O15145 178 aa7.27□□□□□ -1.25
USF1-210ENST00000531842 XPNPEP2O43895 674 aa7.27□□□□□ -1.25
USF1-210ENST00000531842 GMDSO60547 372 aa7.27□□□□□ -1.25
USF1-210ENST00000531842 GADD45GO95257 159 aa7.27□□□□□ -1.25
USF1-210ENST00000531842 PTBP3O95758 552 aaKnown RBP7.27□□□□□ -1.25
USF1-210ENST00000531842 CD33P20138 364 aa7.27□□□□□ -1.25
USF1-210ENST00000531842 CALB2P22676 271 aa7.27□□□□□ -1.25
USF1-210ENST00000531842 EEF1B2P24534 225 aaKnown RBP7.27□□□□□ -1.25
USF1-210ENST00000531842 RRM2P31350 389 aa7.27□□□□□ -1.25
USF1-210ENST00000531842 HMGA2P52926 109 aa7.27□□□□□ -1.25
USF1-210ENST00000531842 TEX36Q5VZQ5 186 aa7.27□□□□□ -1.25
USF1-210ENST00000531842 LCN8Q6JVE9 175 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms