RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 K7EQM0 130 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 CTAG2O75638 210 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 FPR2P25090 351 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 OR8G1Q15617 311 aa13.89□□□□□ -0.19
PCDHA4-203ENST00000530339 ZGLP1P0C6A0 271 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 SULT1A3P0DMM9 295 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 SULT1A4P0DMN0 295 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 ZNF79Q15937 498 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 WDR38Q5JTN6 314 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 NOXO1Q8NFA2 376 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 OR1N1Q8NGS0 311 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 OR4F5Q8NH21 305 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 ZG16BQ96DA0 208 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 ALG14Q96F25 216 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 OR4F4Q96R69 305 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 SUCNR1Q9BXA5 334 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 RAB18Q9NP72 206 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 LRP12Q9Y561 859 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 RAB27BO00194 218 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 HOXC8P31273 242 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 AARDQ4LEZ3 155 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 RPUSD4Q96CM3 377 aaKnown RBP13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 LINC00052Q96N35 136 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 MMP25Q9NPA2 562 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 GDF2Q9UK05 429 aaPredicted RBP13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 TRAV20A0A0B4J274 112 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 METTL12A8MUP2 240 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 DHHO43323 396 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 SELENOPP49908 381 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 DVL1P1P54792 670 aaPredicted RBP13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 CADM4Q8NFZ8 388 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 OR13D1Q8NGV5 346 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 CCL4L1Q8NHW4 92 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 BSCL2Q96G97 398 aaPredicted RBP13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 LY86O95711 162 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 ZNF250P15622 560 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 CXCL3P19876 107 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 PPP1R1AQ13522 171 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 TRA2AQ13595 282 aaKnown RBP eCLIP13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 HABP2Q14520 560 aaPredicted RBP13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 CDONQ4KMG0 1287 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 SLC25A30Q5SVS4 291 aa13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 B3GNTL1Q67FW5 361 aaPredicted RBP13.88□□□□□ -0.19
PCDHA4-203ENST00000530339 TERTO14746 1132 aaKnown RBP13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 CALCRP30988 508 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 SNRPEP62304 92 aaKnown RBP13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 VWA2Q5GFL6 755 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 DMKNQ6E0U4 476 aaPredicted RBP13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 NECAP1Q8NC96 275 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 ACTR3CQ9C0K3 210 aaPredicted RBP13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 ARID1AO14497 2285 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 A0A1W2PNR3 127 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 MPC2O95563 127 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 DSCR4P56555 118 aaPredicted RBP13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 KCNAB1Q14722 419 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 BTNL8Q6UX41 500 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 DBX2Q6ZNG2 339 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 OR8U1Q8NH10 309 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 SPSB1Q96BD6 273 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 REEP6Q96HR9 211 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 ZNF331Q9NQX6 463 aaPredicted RBP13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 RPH3ALQ9UNE2 315 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 FAM221AA4D161 298 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 GABRA1P14867 456 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 FUT6P51993 359 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 MYBPHQ13203 477 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 EIF3IQ13347 325 aaKnown RBP13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 OR8B8Q15620 311 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 MIDNQ504T8 468 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 NCR3LG1Q68D85 454 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 BVESQ8NE79 360 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 TRAF4Q9BUZ4 470 aaPredicted RBP13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 MARF1Q9Y4F3 1742 aaKnown RBP13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 HS3ST1O14792 307 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 PHOX2AO14813 284 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 TMPRSS5Q9H3S3 457 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 LOXL2Q9Y4K0 774 aa13.87□□□□□ -0.19
PCDHA4-203ENST00000530339 TMEM272A0A1B0GTI8 110 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 PRKNO60260 465 aaPredicted RBP13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 CISD3P0C7P0 127 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 CD96P40200 585 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 KCNJ3P48549 501 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 ZNF90Q03938 601 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 CLN3Q13286 438 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 PLA1AQ53H76 456 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 NXF2Q9GZY0 626 aaKnown RBP13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 ZNF816-ZNF321PA0A0X1KG74 233 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 CLN5O75503 358 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 ZNF121P58317 390 aaPredicted RBP13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 THSD4Q6ZMP0 1018 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 ZDHHC23Q8IYP9 409 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 SLC38A6Q8IZM9 456 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 BHLHE23Q8NDY6 225 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 OR10P1Q8NGE3 313 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 MRGPRX3Q96LB0 322 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 MENTQ9BUN1 341 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 MAGT1Q9H0U3 335 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 SIRT3Q9NTG7 399 aaPredicted RBP13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 DUSP13Q9UII6 198 aa13.86□□□□□ -0.19
PCDHA4-203ENST00000530339 CCDC187A0A096LP49 1063 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms