RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 DDX19BQ9UMR2 479 aa3.24□□□□□ -1.89
CASP4-208ENST00000530309 WIF1Q9Y5W5 379 aa3.24□□□□□ -1.89
CASP4-208ENST00000530309 IBTKQ9P2D0 1353 aaPredicted RBP3.24□□□□□ -1.89
CASP4-208ENST00000530309 ADGRA3Q8IWK6 1321 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 AQRO60306 1485 aaKnown RBP eCLIP3.23□□□□□ -1.89
CASP4-208ENST00000530309 LRRC9Q6ZRR7 1453 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 IGHV3-49A0A0A0MS15 119 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 MPDU1O75352 247 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 HSBP1O75506 76 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 CDRT1O95170 752 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 CYB5R3P00387 301 aaPredicted RBP3.23□□□□□ -1.89
CASP4-208ENST00000530309 IGLV3-19P01714 112 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 MT-ND4P03905 459 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 CD5P06127 495 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 GFAPP14136 432 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 OR2B8PP59922 312 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 KRTAP10-10P60014 251 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 IFITM3Q01628 133 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 PTPRKQ15262 1439 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 SLC25A35Q3KQZ1 300 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 TMPRSS11AQ6ZMR5 421 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 MTERF4Q7Z6M4 381 aaKnown RBP3.23□□□□□ -1.89
CASP4-208ENST00000530309 ASZ1Q8WWH4 475 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 NAT6Q93015 286 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 ISG20Q96AZ6 181 aaKnown RBP3.23□□□□□ -1.89
CASP4-208ENST00000530309 RCN3Q96D15 328 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 KCNS1Q96KK3 526 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 C18orf15Q96N68 181 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 MIA2Q96PC5 1412 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 KCNS3Q9BQ31 491 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 NCOA3Q9Y6Q9 1424 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 PLEKHG2Q9H7P9 1386 aa3.23□□□□□ -1.89
CASP4-208ENST00000530309 CCDC18Q5T9S5 1454 aa3.22□□□□□ -1.89
CASP4-208ENST00000530309 RTEL1-TNFRSF6BF6WH68 1400 aa3.22□□□□□ -1.89
CASP4-208ENST00000530309 TGM6O95932 706 aa3.22□□□□□ -1.89
CASP4-208ENST00000530309 CCT6AP40227 531 aaKnown RBP3.22□□□□□ -1.89
CASP4-208ENST00000530309 C5orf64Q2M2E5 130 aa3.22□□□□□ -1.89
CASP4-208ENST00000530309 KLHL40Q2TBA0 621 aa3.22□□□□□ -1.89
CASP4-208ENST00000530309 FAM222AQ5U5X8 452 aa3.22□□□□□ -1.89
CASP4-208ENST00000530309 TTC19Q6DKK2 380 aaPredicted RBP3.22□□□□□ -1.89
CASP4-208ENST00000530309 OPN5Q6U736 354 aa3.22□□□□□ -1.89
CASP4-208ENST00000530309 KIF2BQ8N4N8 673 aa3.22□□□□□ -1.89
CASP4-208ENST00000530309 LRRC52Q8N7C0 313 aa3.22□□□□□ -1.89
CASP4-208ENST00000530309 TMEM105Q8N8V8 129 aa3.22□□□□□ -1.89
CASP4-208ENST00000530309 SPANXA2-OT1Q8N9U9 137 aa3.22□□□□□ -1.89
CASP4-208ENST00000530309 ZNF721Q8TF20 911 aa3.22□□□□□ -1.89
CASP4-208ENST00000530309 SCGB3A2Q96PL1 93 aa3.22□□□□□ -1.89
CASP4-208ENST00000530309 NAA50Q9GZZ1 169 aaKnown RBP3.22□□□□□ -1.89
CASP4-208ENST00000530309 ZNF257Q9Y2Q1 563 aa3.22□□□□□ -1.89
CASP4-208ENST00000530309 NUP214P35658 2090 aaPredicted RBP3.22□□□□□ -1.89
CASP4-208ENST00000530309 KTN1Q86UP2 1357 aaKnown RBP3.22□□□□□ -1.89
CASP4-208ENST00000530309 NAIPQ13075 1403 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 KIAA1107Q9UPP5 1409 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 GOLGA6L7A0A1B0GV03 622 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 ZNF99A8MXY4 864 aaPredicted RBP3.21□□□□□ -1.9
CASP4-208ENST00000530309 SLC19A2O60779 497 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 CTNSO60931 367 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 CATP04040 527 aaKnown RBP3.21□□□□□ -1.9
CASP4-208ENST00000530309 YWHAEP62258 255 aaKnown RBP3.21□□□□□ -1.9
CASP4-208ENST00000530309 NAB1Q13506 487 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 HIKESHIQ53FT3 197 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 PRR9Q5T870 116 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 OR2T5Q6IEZ7 315 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 ERO1BQ86YB8 467 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 RAB43Q86YS6 212 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 ST20-AS1Q8NBB2 130 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 PROKR2Q8NFJ6 384 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 OR2T29Q8NH02 315 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 ISOC2Q96AB3 205 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 NAP1L5Q96NT1 182 aaPredicted RBP3.21□□□□□ -1.9
CASP4-208ENST00000530309 OR4K3Q96R72 315 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 CTRCQ99895 268 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 CCDC94Q9BW85 323 aaPredicted RBP3.21□□□□□ -1.9
CASP4-208ENST00000530309 BLZF1Q9H2G9 400 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 PRSS16Q9NQE7 514 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 CHRAC1Q9NRG0 131 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 TREX1Q9NSU2 369 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 PEF1Q9UBV8 284 aaKnown RBP3.21□□□□□ -1.9
CASP4-208ENST00000530309 RHBDD3Q9Y3P4 386 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 KIF26AQ9ULI4 1882 aaPredicted RBP3.21□□□□□ -1.9
CASP4-208ENST00000530309 BRD4O60885 1362 aaPredicted RBP3.21□□□□□ -1.9
CASP4-208ENST00000530309 GAPVD1Q14C86 1478 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 TIAM1Q13009 1591 aa3.21□□□□□ -1.9
CASP4-208ENST00000530309 NOTCH2Q04721 2471 aa3.2□□□□□ -1.9
CASP4-208ENST00000530309 IGKV1D-17A0A075B6S4 117 aa3.2□□□□□ -1.9
CASP4-208ENST00000530309 IGHV1-3A0A0C4DH29 117 aa3.2□□□□□ -1.9
CASP4-208ENST00000530309 SLC22A20A6NK97 555 aa3.2□□□□□ -1.9
CASP4-208ENST00000530309 K7EM74 188 aa3.2□□□□□ -1.9
CASP4-208ENST00000530309 LGALS9O00182 355 aa3.2□□□□□ -1.9
CASP4-208ENST00000530309 GATBO75879 557 aaKnown RBP3.2□□□□□ -1.9
CASP4-208ENST00000530309 IGKV1-17P01599 117 aa3.2□□□□□ -1.9
CASP4-208ENST00000530309 TUBG1P23258 451 aa3.2□□□□□ -1.9
CASP4-208ENST00000530309 PSMB5P28074 263 aa3.2□□□□□ -1.9
CASP4-208ENST00000530309 UBE2E1P51965 193 aa3.2□□□□□ -1.9
CASP4-208ENST00000530309 DAOAP59103 153 aa3.2□□□□□ -1.9
CASP4-208ENST00000530309 ZNF101Q8IZC7 436 aa3.2□□□□□ -1.9
CASP4-208ENST00000530309 TRAM1L1Q8N609 369 aa3.2□□□□□ -1.9
CASP4-208ENST00000530309 OR1L1Q8NH94 360 aa3.2□□□□□ -1.9
CASP4-208ENST00000530309 DCAKDQ8WVC6 231 aa3.2□□□□□ -1.9
CASP4-208ENST00000530309 CDS1Q92903 461 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms