RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 CEACAM16Q2WEN9 425 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 THEM4Q5T1C6 240 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 DCAF12Q5T6F0 453 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 KCNRGQ8N5I3 272 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 OR51F2Q8NH61 342 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 MAFAQ8NHW3 353 aaPredicted RBP11.01□□□□□ -0.65
SCN3B-206ENST00000530277 SYT3Q9BQG1 590 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 LANCL2Q9NS86 450 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 FANCMQ8IYD8 2048 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 HELZP42694 1942 aaKnown RBP11□□□□□ -0.65
SCN3B-206ENST00000530277 A0A0D9SG52 128 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 ITGB2P05107 769 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 POU2F2P09086 479 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 PSMB6P28072 239 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 CSF2RBP32927 897 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 CYB561P49447 251 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 EFNA3P52797 238 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 SMAD4Q13485 552 aaKnown RBP11□□□□□ -0.65
SCN3B-206ENST00000530277 H3F3CQ6NXT2 135 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 CDH26Q8IXH8 852 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 SLC43A2Q8N370 569 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 RGP1Q92546 391 aaPredicted RBP11□□□□□ -0.65
SCN3B-206ENST00000530277 LINC00052Q96N35 136 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 KCNJ15Q99712 375 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 FAAP24Q9BTP7 215 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 DHHO43323 396 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 LTBRP36941 435 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 TAS2R31P59538 309 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 RAB2AP61019 212 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 UBE2NP61088 152 aaKnown RBP11□□□□□ -0.65
SCN3B-206ENST00000530277 LINC01590Q5TEZ4 76 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 ZNF774Q6NX45 483 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 SLC22A25Q6T423 547 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 PNPLA5Q7Z6Z6 429 aaPredicted RBP11□□□□□ -0.65
SCN3B-206ENST00000530277 CPT1CQ8TCG5 803 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 RRNAD1Q96FB5 475 aaKnown RBP11□□□□□ -0.65
SCN3B-206ENST00000530277 RASL10BQ96S79 203 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 SOX7Q9BT81 388 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 SARGQ9BW04 601 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 UPK3AO75631 287 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 HOXC4P09017 264 aaPredicted RBP11□□□□□ -0.65
SCN3B-206ENST00000530277 DMWDQ09019 674 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 C19orf57Q0VDD7 668 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 TMEM104Q8NE00 496 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 SEMA6DQ8NFY4 1073 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 LRFN1Q9P244 771 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 FAM96BQ9Y3D0 163 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 URGCP-MRPS24S4R325 110 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 THSD7BQ9C0I4 1608 aa11□□□□□ -0.65
SCN3B-206ENST00000530277 C5orf49A4QMS7 147 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 HSD17B6O14756 317 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 ATG12O94817 140 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 ZNF728P0DKX0 622 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 SULT1A3P0DMM9 295 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 SULT1A4P0DMN0 295 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 GLULP15104 373 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 GALNSP34059 522 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 CLDN15P56746 228 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 RPS16P62249 146 aaKnown RBP10.99□□□□□ -0.65
SCN3B-206ENST00000530277 RPS27AP62979 156 aaKnown RBP10.99□□□□□ -0.65
SCN3B-206ENST00000530277 UBA52P62987 128 aaKnown RBP10.99□□□□□ -0.65
SCN3B-206ENST00000530277 KISS1Q15726 138 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 C3AR1Q16581 482 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 MKXQ8IYA7 352 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 FBXL14Q8N1E6 418 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 OR1S1Q8NH92 325 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 SEH1LQ96EE3 360 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 REEP6Q96HR9 211 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 PRDM6Q9NQX0 595 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 ZNF175Q9Y473 711 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 GJE1A6NN92 205 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 EIF1P41567 113 aaKnown RBP10.99□□□□□ -0.65
SCN3B-206ENST00000530277 GAS1P54826 345 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 NAXDQ8IW45 347 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 ANGPTL6Q8NI99 470 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 LRFN5Q96NI6 719 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 HDHD3Q9BSH5 251 aaPredicted RBP10.99□□□□□ -0.65
SCN3B-206ENST00000530277 UFSP2Q9NUQ7 469 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 MRPL22Q9NWU5 206 aaKnown RBP10.99□□□□□ -0.65
SCN3B-206ENST00000530277 LUZP4Q9P127 313 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 CYB5R1Q9UHQ9 305 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 LOC105371267A0A1B0GV96 52 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 ANKUB1A6NFN9 424 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 GRPP07492 148 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 ASAH2BP0C7U1 165 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 FAM157BP0CG42 384 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 OR5H8P0DN80 308 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 GALP22466 123 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 RIPPLY1Q0D2K3 151 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 PGAP1Q75T13 922 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 DOK3Q7L591 496 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 SLC38A9Q8NBW4 561 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 OR8B12Q8NGG6 310 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 ZNF285Q96NJ3 590 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 ZNF275Q9NSD4 429 aaPredicted RBP10.99□□□□□ -0.65
SCN3B-206ENST00000530277 MCTS1Q9ULC4 181 aaKnown RBP10.99□□□□□ -0.65
SCN3B-206ENST00000530277 FBXO7Q9Y3I1 522 aa10.99□□□□□ -0.65
SCN3B-206ENST00000530277 D6RAR5 112 aa10.98□□□□□ -0.65
SCN3B-206ENST00000530277 BGLAPP02818 100 aa10.98□□□□□ -0.65
SCN3B-206ENST00000530277 CCL3P10147 92 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms