RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 RAB40AQ8WXH6 277 aa27.57■■■□□ 2
SSSCA1-205ENST00000527920 CIB1Q99828 191 aa27.57■■■□□ 2
SSSCA1-205ENST00000527920 PAPOLGQ9BWT3 736 aaKnown RBP27.57■■■□□ 2
SSSCA1-205ENST00000527920 RHBDD3Q9Y3P4 386 aa27.57■■■□□ 2
SSSCA1-205ENST00000527920 IGHV2-70DA0A0C4DH43 119 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 A0A0U1RQV5 110 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 CST4P01036 141 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 MRPL3P09001 348 aaKnown RBP27.56■■■□□ 2
SSSCA1-205ENST00000527920 NPY4RP50391 375 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 WDR25Q64LD2 544 aaPredicted RBP27.56■■■□□ 2
SSSCA1-205ENST00000527920 ZNF841Q6ZN19 808 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 KRT74Q7RTS7 529 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 GID4Q8IVV7 300 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 GALNT4Q8N4A0 578 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 GCSAMQ8N6F7 178 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 ITPKCQ96DU7 683 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 OR8B4Q96RC9 309 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 JMJD8Q96S16 334 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 GABARAPL3Q9BY60 117 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 TLNRD1Q9H1K6 362 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 FAM206AQ9NX38 181 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 HAO2Q9NYQ3 351 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 H2AFY2Q9P0M6 372 aaPredicted RBP27.56■■■□□ 2
SSSCA1-205ENST00000527920 OAZ3Q9UMX2 235 aa27.56■■■□□ 2
SSSCA1-205ENST00000527920 OOEPA6NGQ2 149 aa27.55■■■□□ 2
SSSCA1-205ENST00000527920 ANXA2P2A6NMY6 339 aa27.55■■■□□ 2
SSSCA1-205ENST00000527920 FPR2P25090 351 aa27.55■■■□□ 2
SSSCA1-205ENST00000527920 ACKR3P25106 362 aa27.55■■■□□ 2
SSSCA1-205ENST00000527920 CD80P33681 288 aa27.55■■■□□ 2
SSSCA1-205ENST00000527920 CFHR2P36980 270 aa27.55■■■□□ 2
SSSCA1-205ENST00000527920 TUSC1Q2TAM9 212 aa27.55■■■□□ 2
SSSCA1-205ENST00000527920 ARMCX4Q5H9R4 360 aa27.55■■■□□ 2
SSSCA1-205ENST00000527920 LYPD2Q6UXB3 125 aa27.55■■■□□ 2
SSSCA1-205ENST00000527920 ZNF826PQ6ZT77 177 aa27.55■■■□□ 2
SSSCA1-205ENST00000527920 WDR86Q86TI4 376 aa27.55■■■□□ 2
SSSCA1-205ENST00000527920 C19orf18Q8NEA5 215 aa27.55■■■□□ 2
SSSCA1-205ENST00000527920 OR1M1Q8NGA1 313 aa27.55■■■□□ 2
SSSCA1-205ENST00000527920 LYZL4Q96KX0 146 aa27.55■■■□□ 2
SSSCA1-205ENST00000527920 MICU1Q9BPX6 476 aa27.55■■■□□ 2
SSSCA1-205ENST00000527920 M0R129 80 aa27.54■■■□□ 2
SSSCA1-205ENST00000527920 TNFRSF13BO14836 293 aaPredicted RBP27.54■■■□□ 2
SSSCA1-205ENST00000527920 ACTR3P61158 418 aa27.54■■■□□ 2
SSSCA1-205ENST00000527920 TEX36Q5VZQ5 186 aa27.54■■■□□ 2
SSSCA1-205ENST00000527920 CCDC121Q6ZUS5 278 aa27.54■■■□□ 2
SSSCA1-205ENST00000527920 C11orf53Q8IXP5 236 aa27.54■■■□□ 2
SSSCA1-205ENST00000527920 BPIFB2Q8N4F0 458 aa27.54■■■□□ 2
SSSCA1-205ENST00000527920 SEMA6AQ9H2E6 1030 aa27.54■■■□□ 2
SSSCA1-205ENST00000527920 COPS3Q9UNS2 423 aa27.54■■■□□ 2
SSSCA1-205ENST00000527920 KIR2DS1A0A191URI9 304 aa27.53■■■□□ 2
SSSCA1-205ENST00000527920 TMEM269A0A1B0GVZ9 245 aa27.53■■■□□ 2
SSSCA1-205ENST00000527920 hCG_1807616A0A1W2PRN6 198 aa27.53■■■□□ 2
SSSCA1-205ENST00000527920 C3orf80F5H4A9 247 aa27.53■■■□□ 2
SSSCA1-205ENST00000527920 ZNF829Q3KNS6 432 aaPredicted RBP27.53■■■□□ 2
SSSCA1-205ENST00000527920 SFRP4Q6FHJ7 346 aaPredicted RBP27.53■■■□□ 2
SSSCA1-205ENST00000527920 BCDIN3DQ7Z5W3 292 aaKnown RBP27.53■■■□□ 2
SSSCA1-205ENST00000527920 SLC6A7Q99884 636 aa27.53■■■□□ 2
SSSCA1-205ENST00000527920 ADGRL4Q9HBW9 690 aa27.53■■■□□ 2
SSSCA1-205ENST00000527920 NUP50Q9UKX7 468 aa27.53■■■□□ 2
SSSCA1-205ENST00000527920 PRR32B1ATL7 298 aa27.52■■■□□ 2
SSSCA1-205ENST00000527920 ATP6V1B1P15313 513 aa27.52■■■□□ 2
SSSCA1-205ENST00000527920 RIDAP52758 137 aaKnown RBP27.52■■■□□ 2
SSSCA1-205ENST00000527920 HOXA4Q00056 320 aaPredicted RBP27.52■■■□□ 2
SSSCA1-205ENST00000527920 KLF17Q5JT82 389 aaPredicted RBP27.52■■■□□ 2
SSSCA1-205ENST00000527920 BOLLQ8N9W6 283 aaKnown RBP27.52■■■□□ 2
SSSCA1-205ENST00000527920 RBM4BQ9BQ04 359 aaKnown RBP27.52■■■□□ 2
SSSCA1-205ENST00000527920 RTL8AQ9BWD3 113 aa27.52■■■□□ 2
SSSCA1-205ENST00000527920 ERVK-18Q9QC07 812 aa27.52■■■□□ 2
SSSCA1-205ENST00000527920 TMEM210A6NLX4 147 aa27.51■■□□□ 1.99
SSSCA1-205ENST00000527920 PRDX4Q13162 271 aa27.51■■□□□ 1.99
SSSCA1-205ENST00000527920 C11orf91Q3C1V1 193 aa27.51■■□□□ 1.99
SSSCA1-205ENST00000527920 WDR82Q6UXN9 313 aa27.51■■□□□ 1.99
SSSCA1-205ENST00000527920 OR5P3Q8WZ94 311 aa27.51■■□□□ 1.99
SSSCA1-205ENST00000527920 IL4I1Q96RQ9 567 aa27.51■■□□□ 1.99
SSSCA1-205ENST00000527920 PPP1R3EQ9H7J1 279 aa27.51■■□□□ 1.99
SSSCA1-205ENST00000527920 CLN6Q9NWW5 311 aa27.51■■□□□ 1.99
SSSCA1-205ENST00000527920 CTSZQ9UBR2 303 aa27.51■■□□□ 1.99
SSSCA1-205ENST00000527920 NUFIP1Q9UHK0 495 aaKnown RBP27.51■■□□□ 1.99
SSSCA1-205ENST00000527920 PSMD9O00233 223 aa27.5■■□□□ 1.99
SSSCA1-205ENST00000527920 MUC1P15941 1255 aaPredicted RBP27.5■■□□□ 1.99
SSSCA1-205ENST00000527920 FAM76BQ5HYJ3 339 aa27.5■■□□□ 1.99
SSSCA1-205ENST00000527920 CD276Q5ZPR3 534 aa27.5■■□□□ 1.99
SSSCA1-205ENST00000527920 ZFP1Q6P2D0 407 aa27.5■■□□□ 1.99
SSSCA1-205ENST00000527920 ZNF322Q6U7Q0 402 aaPredicted RBP27.5■■□□□ 1.99
SSSCA1-205ENST00000527920 FAM90A1Q86YD7 464 aa27.5■■□□□ 1.99
SSSCA1-205ENST00000527920 SLC35F2Q8IXU6 374 aa27.5■■□□□ 1.99
SSSCA1-205ENST00000527920 PYDC1Q8WXC3 89 aa27.5■■□□□ 1.99
SSSCA1-205ENST00000527920 UPRTQ96BW1 309 aa27.5■■□□□ 1.99
SSSCA1-205ENST00000527920 NUDT16L1Q9BRJ7 211 aaKnown RBP27.5■■□□□ 1.99
SSSCA1-205ENST00000527920 PBOV1Q9GZY1 135 aa27.5■■□□□ 1.99
SSSCA1-205ENST00000527920 KAAG1Q9UBP8 84 aa27.5■■□□□ 1.99
SSSCA1-205ENST00000527920 WARS2Q9UGM6 360 aaKnown RBP27.5■■□□□ 1.99
SSSCA1-205ENST00000527920 DOCK11Q5JSL3 2073 aa27.49■■□□□ 1.99
SSSCA1-205ENST00000527920 IGLV3-1P01715 115 aa27.49■■□□□ 1.99
SSSCA1-205ENST00000527920 MAP2K3P46734 347 aa27.49■■□□□ 1.99
SSSCA1-205ENST00000527920 CSNK2BP67870 215 aa27.49■■□□□ 1.99
SSSCA1-205ENST00000527920 FAM81AQ8TBF8 368 aa27.49■■□□□ 1.99
SSSCA1-205ENST00000527920 LRRC29Q8WV35 223 aa27.49■■□□□ 1.99
SSSCA1-205ENST00000527920 PKP2Q99959 881 aa27.49■■□□□ 1.99
SSSCA1-205ENST00000527920 MOB1AQ9H8S9 216 aa27.49■■□□□ 1.99
SSSCA1-205ENST00000527920 IKZF2Q9UKS7 526 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms