RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 OR8D4Q8NGM9 314 aa19.31■□□□□ 0.68
CPSF1-202ENST00000527827 C8orf46Q8TAG6 207 aa19.31■□□□□ 0.68
CPSF1-202ENST00000527827 SGK3Q96BR1 496 aa19.31■□□□□ 0.68
CPSF1-202ENST00000527827 C12orf43Q96C57 262 aaKnown RBP19.31■□□□□ 0.68
CPSF1-202ENST00000527827 hCG_38984A0A1B0GV85 526 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 ZNF593O00488 134 aaPredicted RBP19.3■□□□□ 0.68
CPSF1-202ENST00000527827 GPR37O15354 613 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 NDUFB3O43676 98 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 FABP3P05413 133 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 GYPBP06028 91 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 CSF1P09603 554 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 FMO3P31513 532 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 KLHL12Q53G59 568 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 ATPAF1Q5TC12 328 aaPredicted RBP19.3■□□□□ 0.68
CPSF1-202ENST00000527827 SLC35E4Q6ICL7 350 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 RPL13AP3Q6NVV1 102 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 OR5T2Q8NGG2 359 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 MCUR1Q96AQ8 359 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 CMTM5Q96DZ9 223 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 REEP6Q96HR9 211 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 NMNAT2Q9BZQ4 307 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 TLNRD1Q9H1K6 362 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 IL20Q9NYY1 176 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 PLXNB1O43157 2135 aa19.3■□□□□ 0.68
CPSF1-202ENST00000527827 DHRS12A0PJE2 317 aa19.29■□□□□ 0.68
CPSF1-202ENST00000527827 CDIPTO14735 213 aa19.29■□□□□ 0.68
CPSF1-202ENST00000527827 TIPRLO75663 272 aa19.29■□□□□ 0.68
CPSF1-202ENST00000527827 SAA4P35542 130 aa19.29■□□□□ 0.68
CPSF1-202ENST00000527827 NAA10P41227 235 aaPredicted RBP19.29■□□□□ 0.68
CPSF1-202ENST00000527827 CX3CR1P49238 355 aa19.29■□□□□ 0.68
CPSF1-202ENST00000527827 TIGD6Q17RP2 521 aa19.29■□□□□ 0.68
CPSF1-202ENST00000527827 PRSS45Q7RTY3 260 aa19.29■□□□□ 0.68
CPSF1-202ENST00000527827 OR9Q2Q8NGE9 314 aa19.29■□□□□ 0.68
CPSF1-202ENST00000527827 BTBD10Q9BSF8 475 aa19.29■□□□□ 0.68
CPSF1-202ENST00000527827 MYLK2Q9H1R3 596 aa19.29■□□□□ 0.68
CPSF1-202ENST00000527827 IL1RAPQ9NPH3 570 aa19.29■□□□□ 0.68
CPSF1-202ENST00000527827 MAGEL2Q9UJ55 1249 aa19.29■□□□□ 0.68
CPSF1-202ENST00000527827 ANXA2P07355 339 aaKnown RBP19.28■□□□□ 0.68
CPSF1-202ENST00000527827 CLUP10909 449 aa19.28■□□□□ 0.68
CPSF1-202ENST00000527827 MSX2P35548 267 aaPredicted RBP19.28■□□□□ 0.68
CPSF1-202ENST00000527827 GRB2P62993 217 aaKnown RBP19.28■□□□□ 0.68
CPSF1-202ENST00000527827 CRMP1Q14194 572 aa19.28■□□□□ 0.68
CPSF1-202ENST00000527827 BEAN1Q3B7T3 259 aa19.28■□□□□ 0.68
CPSF1-202ENST00000527827 LRRC10Q5BKY1 277 aa19.28■□□□□ 0.68
CPSF1-202ENST00000527827 GALNT4Q8N4A0 578 aa19.28■□□□□ 0.68
CPSF1-202ENST00000527827 OR5R1Q8NH85 324 aa19.28■□□□□ 0.68
CPSF1-202ENST00000527827 WDR13Q9H1Z4 485 aa19.28■□□□□ 0.68
CPSF1-202ENST00000527827 PPA2Q9H2U2 334 aa19.28■□□□□ 0.68
CPSF1-202ENST00000527827 HAO2Q9NYQ3 351 aa19.28■□□□□ 0.68
CPSF1-202ENST00000527827 ZNF319Q9P2F9 582 aa19.28■□□□□ 0.68
CPSF1-202ENST00000527827 FBLN5Q9UBX5 448 aa19.28■□□□□ 0.68
CPSF1-202ENST00000527827 RHBDD3Q9Y3P4 386 aa19.28■□□□□ 0.68
CPSF1-202ENST00000527827 MEIOCA2RUB1 952 aa19.27■□□□□ 0.68
CPSF1-202ENST00000527827 G3V4G9 280 aa19.27■□□□□ 0.68
CPSF1-202ENST00000527827 TFF1P04155 84 aa19.27■□□□□ 0.68
CPSF1-202ENST00000527827 HSD17B1P14061 328 aa19.27■□□□□ 0.68
CPSF1-202ENST00000527827 SPI1P17947 270 aa19.27■□□□□ 0.68
CPSF1-202ENST00000527827 SLC15A1P46059 708 aa19.27■□□□□ 0.68
CPSF1-202ENST00000527827 GSK3AP49840 483 aa19.27■□□□□ 0.68
CPSF1-202ENST00000527827 HMGA2P52926 109 aa19.27■□□□□ 0.68
CPSF1-202ENST00000527827 FBLN7Q53RD9 439 aa19.27■□□□□ 0.68
CPSF1-202ENST00000527827 C1orf122Q6ZSJ8 110 aa19.27■□□□□ 0.68
CPSF1-202ENST00000527827 H1FXQ92522 213 aaKnown RBP19.27■□□□□ 0.68
CPSF1-202ENST00000527827 ITPKCQ96DU7 683 aa19.27■□□□□ 0.68
CPSF1-202ENST00000527827 NSMCE2Q96MF7 247 aa19.27■□□□□ 0.68
CPSF1-202ENST00000527827 SNTG1Q9NSN8 517 aa19.27■□□□□ 0.68
CPSF1-202ENST00000527827 LYVE1Q9Y5Y7 322 aa19.27■□□□□ 0.68
CPSF1-202ENST00000527827 ANKRD61A6NGH8 418 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 PAHP00439 452 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 PRDX6P30041 224 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 GABRA5P31644 462 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 UBE2E1P51965 193 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 SLC25A1P53007 311 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 GMFBP60983 142 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 LINC01590Q5TEZ4 76 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 ZNF770Q6IQ21 691 aaPredicted RBP19.26■□□□□ 0.67
CPSF1-202ENST00000527827 ZNF788Q6ZQV5 615 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 RASSF6Q6ZTQ3 369 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 FAM57BQ71RH2 274 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 OR4Q3Q8NH05 313 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 PPP1R35Q8TAP8 253 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 GAFA1Q96PS6 74 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 RAB3IPQ96QF0 476 aaPredicted RBP19.26■□□□□ 0.67
CPSF1-202ENST00000527827 PAPOLGQ9BWT3 736 aaKnown RBP19.26■□□□□ 0.67
CPSF1-202ENST00000527827 DNTTIP1Q9H147 329 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 TOR3AQ9H497 397 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 SIGLEC9Q9Y336 463 aa19.26■□□□□ 0.67
CPSF1-202ENST00000527827 ARPC2O15144 300 aa19.25■□□□□ 0.67
CPSF1-202ENST00000527827 GASTP01350 101 aa19.25■□□□□ 0.67
CPSF1-202ENST00000527827 GNALP38405 381 aa19.25■□□□□ 0.67
CPSF1-202ENST00000527827 ZNF121P58317 390 aaPredicted RBP19.25■□□□□ 0.67
CPSF1-202ENST00000527827 MXRA7P84157 204 aa19.25■□□□□ 0.67
CPSF1-202ENST00000527827 EIF2B1Q14232 305 aaKnown RBP19.25■□□□□ 0.67
CPSF1-202ENST00000527827 HERPUD1Q15011 391 aa19.25■□□□□ 0.67
CPSF1-202ENST00000527827 DGUOKQ16854 277 aa19.25■□□□□ 0.67
CPSF1-202ENST00000527827 HIST2H2BDQ6DRA6 164 aa19.25■□□□□ 0.67
CPSF1-202ENST00000527827 BEND2Q8NDZ0 799 aa19.25■□□□□ 0.67
CPSF1-202ENST00000527827 OR6K6Q8NGW6 343 aa19.25■□□□□ 0.67
CPSF1-202ENST00000527827 OR10Z1Q8NGY1 313 aa19.25■□□□□ 0.67
CPSF1-202ENST00000527827 RNF133Q8WVZ7 376 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms