RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 TOMM5Q8N4H5 51 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 JAGN1Q8N5M9 183 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 NKAIN3Q8N8D7 197 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 C1orf162Q8NEQ5 155 aaPredicted RBP16.3■□□□□ 0.2
SMPD1-203ENST00000527275 OR6M1Q8NGM8 313 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 HPS1Q92902 700 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 PGAM5Q96HS1 289 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 SOX7Q9BT81 388 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 RNF121Q9H920 327 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 NLKQ9UBE8 527 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 A0A1B0GUH1 482 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 BDKRB2P30411 391 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 SLC6A9P48067 706 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 RAB1AP62820 205 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 PABPC1L2AQ5JQF8 200 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 BHLHA15Q7RTS1 189 aaPredicted RBP16.3■□□□□ 0.2
SMPD1-203ENST00000527275 GLCCI1Q86VQ1 547 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 OR1M1Q8NGA1 313 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 SLC7A6Q92536 515 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 FOXRED1Q96CU9 486 aaPredicted RBP16.3■□□□□ 0.2
SMPD1-203ENST00000527275 CACNG2Q9Y698 323 aa16.3■□□□□ 0.2
SMPD1-203ENST00000527275 SYNGR3O43761 229 aa16.29■□□□□ 0.2
SMPD1-203ENST00000527275 ZNF20P17024 532 aa16.29■□□□□ 0.2
SMPD1-203ENST00000527275 CCL1P22362 96 aa16.29■□□□□ 0.2
SMPD1-203ENST00000527275 EFNB2P52799 333 aa16.29■□□□□ 0.2
SMPD1-203ENST00000527275 GFOD2Q3B7J2 385 aa16.29■□□□□ 0.2
SMPD1-203ENST00000527275 AGAP6Q5VW22 663 aa16.29■□□□□ 0.2
SMPD1-203ENST00000527275 DOK3Q7L591 496 aa16.29■□□□□ 0.2
SMPD1-203ENST00000527275 CPEB3Q8NE35 698 aaKnown RBP16.29■□□□□ 0.2
SMPD1-203ENST00000527275 SPTSSAQ969W0 71 aa16.29■□□□□ 0.2
SMPD1-203ENST00000527275 BOD1Q96IK1 185 aa16.29■□□□□ 0.2
SMPD1-203ENST00000527275 FAM71F1Q96KD3 344 aaPredicted RBP16.29■□□□□ 0.2
SMPD1-203ENST00000527275 WNT5BQ9H1J7 359 aa16.29■□□□□ 0.2
SMPD1-203ENST00000527275 B3GNT2Q9NY97 397 aa16.29■□□□□ 0.2
SMPD1-203ENST00000527275 COQ3Q9NZJ6 369 aa16.29■□□□□ 0.2
SMPD1-203ENST00000527275 LOC390937A0A1W2PQ73 354 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 MEIOCA2RUB1 952 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 APOC1P02654 83 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 ARSBP15848 533 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 PSMB1P20618 241 aaKnown RBP16.28■□□□□ 0.2
SMPD1-203ENST00000527275 OTX1P32242 354 aaPredicted RBP16.28■□□□□ 0.2
SMPD1-203ENST00000527275 MNDAP41218 407 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 TAS2R20P59543 309 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 UBE2NP61088 152 aaKnown RBP16.28■□□□□ 0.2
SMPD1-203ENST00000527275 RAB35Q15286 201 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 GSG1Q2KHT4 349 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 C1orf100Q5SVJ3 147 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 LYPD6Q86Y78 171 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 C15orf40Q8WUR7 153 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 KCNK15Q9H427 330 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 AUNIPQ9H7T9 357 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 TMEM138Q9NPI0 162 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 SPTBN1Q01082 2364 aaKnown RBP16.28■□□□□ 0.2
SMPD1-203ENST00000527275 TMEM272A0A1B0GTI8 110 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 GABARAPH6UMI1 98 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 XRCC3O43542 346 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 TPPPO94811 219 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 DBHP09172 617 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 RAB3AP20336 220 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 CHRNB4P30926 498 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 ZNF529Q6P280 563 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 CHAC2Q8WUX2 184 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 GCDHQ92947 438 aaPredicted RBP16.28■□□□□ 0.2
SMPD1-203ENST00000527275 SLC17A5Q9NRA2 495 aa16.28■□□□□ 0.2
SMPD1-203ENST00000527275 C5orf63A6NC05 138 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 CENPXA8MT69 81 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 M0R135 149 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 ORC5O43913 435 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 CTAG2O75638 210 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 IL32P24001 234 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 SLC6A1P30531 599 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 ARR3P36575 388 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 RSBN1Q5VWQ0 802 aaPredicted RBP16.27■□□□□ 0.2
SMPD1-203ENST00000527275 WDR31Q8NA23 367 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 OR52N4Q8NGI2 321 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 OR13C9Q8NGT0 318 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 OR52I2Q8NH67 350 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 OR1F12Q8NHA8 337 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 FCAMRQ8WWV6 532 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 NANOS1Q8WY41 292 aaKnown RBP16.27■□□□□ 0.2
SMPD1-203ENST00000527275 S100PBPQ96BU1 408 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 ZNF799Q96GE5 643 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 SORCS2Q96PQ0 1159 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 DIABLOQ9NR28 239 aa16.27■□□□□ 0.2
SMPD1-203ENST00000527275 ERRFI1Q9UJM3 462 aaPredicted RBP16.27■□□□□ 0.2
SMPD1-203ENST00000527275 RALYQ9UKM9 306 aaKnown RBP16.27■□□□□ 0.2
SMPD1-203ENST00000527275 OR5H1A6NKK0 313 aa16.27■□□□□ 0.19
SMPD1-203ENST00000527275 HOXC12P31275 282 aa16.27■□□□□ 0.19
SMPD1-203ENST00000527275 GDNFP39905 211 aa16.27■□□□□ 0.19
SMPD1-203ENST00000527275 HTR5AP47898 357 aa16.27■□□□□ 0.19
SMPD1-203ENST00000527275 MRPS10P82664 201 aaKnown RBP16.27■□□□□ 0.19
SMPD1-203ENST00000527275 ECH1Q13011 328 aa16.27■□□□□ 0.19
SMPD1-203ENST00000527275 CDSNQ15517 529 aa16.27■□□□□ 0.19
SMPD1-203ENST00000527275 C4orf17Q53FE4 359 aa16.27■□□□□ 0.19
SMPD1-203ENST00000527275 MDP1Q86V88 176 aa16.27■□□□□ 0.19
SMPD1-203ENST00000527275 CCDC36Q8IYA8 594 aa16.27■□□□□ 0.19
SMPD1-203ENST00000527275 C17orf78Q8N4C9 275 aa16.27■□□□□ 0.19
SMPD1-203ENST00000527275 PLEKHA1Q9HB21 404 aa16.27■□□□□ 0.19
SMPD1-203ENST00000527275 ELOVL5Q9NYP7 299 aa16.27■□□□□ 0.19
SMPD1-203ENST00000527275 NPAP1Q9NZP6 1156 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms