RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 NAA11Q9BSU3 229 aaPredicted RBP1.14□□□□□ -2.23
CD44-212ENST00000524922 CCDC106Q9BWC9 280 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 SRXN1Q9BYN0 137 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 MRPL37Q9BZE1 423 aaKnown RBP1.14□□□□□ -2.23
CD44-212ENST00000524922 OSBPL8Q9BZF1 889 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 SLC22A4Q9H015 551 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 SIRPDQ9H106 197 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 SPNS1Q9H2V7 528 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 DSN1Q9H410 356 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 FAM96AQ9H5X1 160 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 RMND5AQ9H871 391 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 JPT2Q9H910 190 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 NANOGQ9H9S0 305 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 FOLH1BQ9HBA9 442 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 TMEM106BQ9NUM4 274 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 ACER3Q9NUN7 267 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 GIMAP4Q9NUV9 329 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 TREM2Q9NZC2 230 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 MRPL15Q9P015 296 aaKnown RBP1.14□□□□□ -2.23
CD44-212ENST00000524922 STX18Q9P2W9 335 aaKnown RBP1.14□□□□□ -2.23
CD44-212ENST00000524922 CHRNA9Q9UGM1 479 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 ZNF490Q9ULM2 529 aaPredicted RBP1.14□□□□□ -2.23
CD44-212ENST00000524922 SLC22A14Q9Y267 594 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 SLC35A3Q9Y2D2 325 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 ZNF780BQ9Y6R6 833 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 TET2Q6N021 2002 aaPredicted RBP1.14□□□□□ -2.23
CD44-212ENST00000524922 LRP2P98164 4655 aa1.14□□□□□ -2.23
CD44-212ENST00000524922 SORL1Q92673 2214 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 FAT1Q14517 4588 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 VPS13BQ7Z7G8 4022 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 PKD1P98161 4303 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 CENPVL3A0A0U1RRI6 287 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 WI2-2373I1.2A0A1W2PRP0 233 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 HTR3EA5X5Y0 456 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 OR51F1A6NGY5 319 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 SDR42E2A6NKP2 422 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 CEACAM18A8MTB9 384 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 TRAPPC2LH3BP13 241 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 H7C0C1 242 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 K7EPI3 171 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 SULT2B1O00204 365 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 UPK1AO00322 258 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 ZNF264O43296 627 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 SPOPO43791 374 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 OR2T1O43869 369 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 NPIPB7O75200 414 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 SH3BGRLO75368 114 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 LY6HO94772 140 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 UTS2O95399 124 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 TGDSO95455 350 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 RAB36O95755 333 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 IFNA6P05013 189 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 TPM3P06753 285 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 APRTP07741 180 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 VIMP08670 466 aaKnown RBP1.13□□□□□ -2.23
CD44-212ENST00000524922 CT62P0C5K7 136 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 PGA5P0DJD9 388 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 PRPS2P11908 318 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 HPGDP15428 266 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 MGMTP16455 207 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 PGAM1P18669 254 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 EPORP19235 508 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 KITLGP21583 273 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 EEF1B2P24534 225 aaKnown RBP1.13□□□□□ -2.23
CD44-212ENST00000524922 FASP25445 335 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 CNTFRP26992 372 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 CALCRP30988 508 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 SLC1A2P43004 574 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 MAGEA4P43358 317 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 ATP5OP48047 213 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 P2RY4P51582 365 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 CCNG1P51959 295 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 RAP1GDS1P52306 607 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 MAPK12P53778 367 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 CDH13P55290 713 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 RUNX1Q01196 453 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 SPIBQ01892 262 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 MZT1Q08AG7 82 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 MERTKQ12866 999 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 FOXF1Q12946 379 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 CHIT1Q13231 466 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 SKP2Q13309 424 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 PMS2P3Q13401 168 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 SNTB2Q13425 540 aaKnown RBP1.13□□□□□ -2.23
CD44-212ENST00000524922 NAB1Q13506 487 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 CAMK2DQ13557 499 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 PCLAFQ15004 111 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 ZNF141Q15928 474 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 CARTPTQ16568 116 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 Q1RN00 199 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 TRMT5Q32P41 509 aaKnown RBP1.13□□□□□ -2.23
CD44-212ENST00000524922 TMEM176BQ3YBM2 270 aaPredicted RBP1.13□□□□□ -2.23
CD44-212ENST00000524922 SPANXN3Q5MJ09 141 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 C9orf66Q5T8R8 295 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 METTL11BQ5VVY1 283 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 PLBD1Q6P4A8 553 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 ARL9Q6T311 187 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 DGAT2L6Q6ZPD8 337 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 FRA10AC1Q70Z53 315 aa1.13□□□□□ -2.23
CD44-212ENST00000524922 ANKRD46Q86W74 232 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms