RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 SPSB4Q96A44 273 aa11.28□□□□□ -0.6
CSTF3-206ENST00000524827 C7orf34Q96L11 122 aa11.28□□□□□ -0.6
CSTF3-206ENST00000524827 SSX3Q99909 188 aa11.28□□□□□ -0.6
CSTF3-206ENST00000524827 RANBP3Q9H6Z4 567 aaPredicted RBP11.28□□□□□ -0.6
CSTF3-206ENST00000524827 METTL8Q9H825 291 aaKnown RBP11.28□□□□□ -0.6
CSTF3-206ENST00000524827 NKX6-3A6NJ46 265 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 M0R1W7 72 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 IDH3BO43837 385 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 TIPRLO75663 272 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 TFF1P04155 84 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 VSIG10L2P0DP72 767 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 NAA10P41227 235 aaPredicted RBP11.27□□□□□ -0.61
CSTF3-206ENST00000524827 GMFBP60983 142 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 FAM3AP98173 230 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.27□□□□□ -0.61
CSTF3-206ENST00000524827 NSUN5P1Q3KNT7 163 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 ATPAF1Q5TC12 328 aaPredicted RBP11.27□□□□□ -0.61
CSTF3-206ENST00000524827 HCP5Q6MZN7 132 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 CRIP3Q6Q6R5 217 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 SLC16A9Q7RTY1 509 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 FAM86B1Q8N7N1 296 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 PROKR2Q8NFJ6 384 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 OR4S1Q8NGB4 309 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 OR51G2Q8NGK0 314 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 OR9Q1Q8NGQ5 310 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 ZNRF4Q8WWF5 429 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 SGCDQ92629 289 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 CLPTM1LQ96KA5 538 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 KCNJ15Q99712 375 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 FAM234AQ9H0X4 552 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 PPP1R3EQ9H7J1 279 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 SNTG1Q9NSN8 517 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 HAO2Q9NYQ3 351 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 COMMD3-BMI1R4GMX3 469 aa11.27□□□□□ -0.61
CSTF3-206ENST00000524827 A0A1W2PQ09 198 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 CDIPTO14735 213 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 TBX1O43435 398 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 TAF13Q15543 124 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 DGUOKQ16854 277 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 LRRC75BQ2VPJ9 315 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 CGB2Q6NT52 195 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 PGBD2Q6P3X8 592 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 CYB561A3Q8NBI2 242 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 OR51L1Q8NGJ5 315 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 PHF21AQ96BD5 680 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 SLAMF6Q96DU3 332 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 AJUBAQ96IF1 538 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 GAFA1Q96PS6 74 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 RAB3IPQ96QF0 476 aaPredicted RBP11.26□□□□□ -0.61
CSTF3-206ENST00000524827 KCTD14Q9BQ13 255 aaPredicted RBP11.26□□□□□ -0.61
CSTF3-206ENST00000524827 DNTTIP1Q9H147 329 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 TLNRD1Q9H1K6 362 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 WDR13Q9H1Z4 485 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 RAB18Q9NP72 206 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 CENPMQ9NSP4 180 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 SLC25A10Q9UBX3 287 aaPredicted RBP11.26□□□□□ -0.61
CSTF3-206ENST00000524827 ZNF391Q9UJN7 358 aa11.26□□□□□ -0.61
CSTF3-206ENST00000524827 hCG_38984A0A1B0GV85 526 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 MEGF11A6BM72 1044 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 ZNF878C9JN71 531 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 CHST1O43916 411 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 FBXO24O75426 580 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 SPARCP09486 303 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 NDUFB7P17568 137 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 PAX6P26367 422 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 KRT72Q14CN4 511 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 TIGD6Q17RP2 521 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 VAX1Q5SQQ9 334 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 C8orf82Q6P1X6 216 aaPredicted RBP11.25□□□□□ -0.61
CSTF3-206ENST00000524827 ZNF788Q6ZQV5 615 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 OR2T4Q8NH00 348 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 DUS3LQ96G46 650 aaKnown RBP11.25□□□□□ -0.61
CSTF3-206ENST00000524827 REEP6Q96HR9 211 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 DDOQ99489 341 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 HOPXQ9BPY8 73 aaPredicted RBP11.25□□□□□ -0.61
CSTF3-206ENST00000524827 PAPOLGQ9BWT3 736 aaKnown RBP11.25□□□□□ -0.61
CSTF3-206ENST00000524827 NPFFR1Q9GZQ6 430 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 MMP28Q9H239 520 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 ELL3Q9HB65 397 aaPredicted RBP11.25□□□□□ -0.61
CSTF3-206ENST00000524827 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.25□□□□□ -0.61
CSTF3-206ENST00000524827 FGFR1OP2Q9NVK5 253 aa11.25□□□□□ -0.61
CSTF3-206ENST00000524827 SF3B6Q9Y3B4 125 aaKnown RBP11.25□□□□□ -0.61
CSTF3-206ENST00000524827 SLC22A2O15244 555 aa11.24□□□□□ -0.61
CSTF3-206ENST00000524827 SIGLEC5O15389 551 aa11.24□□□□□ -0.61
CSTF3-206ENST00000524827 ANGPTL7O43827 346 aa11.24□□□□□ -0.61
CSTF3-206ENST00000524827 GADD45GO95257 159 aa11.24□□□□□ -0.61
CSTF3-206ENST00000524827 ANXA2P07355 339 aaKnown RBP11.24□□□□□ -0.61
CSTF3-206ENST00000524827 CD28P10747 220 aa11.24□□□□□ -0.61
CSTF3-206ENST00000524827 POU1F1P28069 291 aa11.24□□□□□ -0.61
CSTF3-206ENST00000524827 GNALP38405 381 aa11.24□□□□□ -0.61
CSTF3-206ENST00000524827 GSSP48637 474 aa11.24□□□□□ -0.61
CSTF3-206ENST00000524827 CX3CR1P49238 355 aa11.24□□□□□ -0.61
CSTF3-206ENST00000524827 ENTPD1P49961 510 aa11.24□□□□□ -0.61
CSTF3-206ENST00000524827 CAV3P56539 151 aa11.24□□□□□ -0.61
CSTF3-206ENST00000524827 SMIM11AP58511 58 aa11.24□□□□□ -0.61
CSTF3-206ENST00000524827 MXRA7P84157 204 aa11.24□□□□□ -0.61
CSTF3-206ENST00000524827 SPIBQ01892 262 aa11.24□□□□□ -0.61
CSTF3-206ENST00000524827 BLMHQ13867 455 aa11.24□□□□□ -0.61
CSTF3-206ENST00000524827 AANATQ16613 207 aa11.24□□□□□ -0.61
CSTF3-206ENST00000524827 KLHL12Q53G59 568 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms