RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	FCER2	P06734	321 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	TBP	P20226	339 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	BDKRB2	P30411	391 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	RORA	P35398	523 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	SLC6A9	P48067	706 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	RIDA	P52758	137 aa	Known RBP	6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	ATP1B3	P54709	279 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	SLC37A1	P57057	533 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	DCD	P81605	110 aa	Known RBP	6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	ZNF117	Q03924	483 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	CHAF1B	Q13112	559 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	BIK	Q13323	160 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	PPP1R1A	Q13522	171 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	MST1L	Q2TV78	715 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	PAN3	Q58A45	887 aa	Known RBP	6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	ZNF529	Q6P280	563 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	C11orf88	Q6PI97	169 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	PAPD4	Q6PIY7	484 aa	Known RBP	6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	C17orf107	Q6ZR85	190 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	LDLRAD3	Q86YD5	345 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	PUSL1	Q8N0Z8	303 aa	Known RBP	6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	C10orf53	Q8N6V4	93 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	SLC30A7	Q8NEW0	376 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	OR51A2	Q8NGJ7	313 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	OR52N5	Q8NH56	324 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	PHOSPHO1	Q8TCT1	267 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	PPP1R14A	Q96A00	147 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	ADIPOR1	Q96A54	375 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	ZBTB8A	Q96BR9	441 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	PRRT1	Q99946	306 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	ABHD6	Q9BV23	337 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	RTN4R	Q9BZR6	473 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	CST11	Q9H112	138 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	NXF5	Q9H1B4	397 aa	Known RBP	6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	CYTL1	Q9NRR1	136 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	LANCL2	Q9NS86	450 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	HPF1	Q9NWY4	346 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	CGGBP1	Q9UFW8	167 aa	Predicted RBP	6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	SHPK	Q9UHJ6	478 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	PCDHB10	Q9UN67	800 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	NBPF19	A0A087WUL8	3843 aa		6.91	□□□□□ -1.3
SPIDR-223	ENST00000524033	CELSR2	Q9HCU4	2923 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	LRRK2	Q5S007	2527 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	CENPE	Q02224	2701 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	LOC107986453	A0A1B0GWG9	222 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	NPIPB13	A6NJU9	1138 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033		C9J4A7	227 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	NPIPB4	C9JG80	1138 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	CCS	O14618	274 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	SSX5	O60225	188 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	TSPAN2	O60636	221 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	DDAH2	O95865	285 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	CYB5A	P00167	134 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	HLA-A	P01891	365 aa	Known RBP	6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	CD2	P06729	351 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	CRH	P06850	196 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	CD63	P08962	238 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	CTLA4	P16410	223 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	PRKACA	P17612	351 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	MAOA	P21397	527 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	HSD11B1	P28845	292 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	HOXA1	P49639	335 aa	Predicted RBP	6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	GSK3A	P49840	483 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	PNLIPRP2	P54317	469 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	B2M	P61769	119 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	SKP1	P63208	163 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	SRSF1	Q07955	248 aa	Known RBP eCLIP	6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	SCRN3	Q0VDG4	424 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	ZP4	Q12836	540 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	INPP5J	Q15735	1006 aa	Predicted RBP	6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	ACKR1	Q16570	336 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	GLYATL3	Q5SZD4	288 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	C1orf189	Q5VU69	101 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	C1QL3	Q5VWW1	255 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	ELP2	Q6IA86	826 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	RAB12	Q6IQ22	244 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	LIN54	Q6MZP7	749 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	KCTD18	Q6PI47	426 aa	Predicted RBP	6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	DEGS2	Q6QHC5	323 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	DRAM2	Q6UX65	266 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	MAMDC2	Q7Z304	686 aa	Predicted RBP	6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	MDGA2	Q7Z553	956 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	FJX1	Q86VR8	437 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	ZNF584	Q8IVC4	421 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	FAM169B	Q8N8A8	192 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	ZNF321P	Q8N8H1	164 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	TMEM185A	Q8NFB2	350 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	OR5AP2	Q8NGF4	316 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	OR4D6	Q8NGJ1	314 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	OR8S1	Q8NH09	359 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	ST7L	Q8TDW4	575 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	PTPMT1	Q8WUK0	201 aa	Predicted RBP	6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	PPP1R1C	Q8WVI7	109 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	FOXRED1	Q96CU9	486 aa	Predicted RBP	6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	PIK3IP1	Q96FE7	263 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	SLC25A44	Q96H78	314 aa	Predicted RBP	6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	CHRNA10	Q9GZZ6	450 aa		6.9	□□□□□ -1.3
SPIDR-223	ENST00000524033	C7orf69	Q9H7B7	122 aa		6.9	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms