RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 EIF1P41567 113 aaKnown RBP9.75□□□□□ -0.85
HDAC9-228ENST00000524023 CBX5P45973 191 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 CLDN17P56750 224 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 STARD6P59095 220 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 SLC35A1P78382 337 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 CYCSP99999 105 aaKnown RBP9.75□□□□□ -0.85
HDAC9-228ENST00000524023 CLEC18BQ6UXF7 455 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 FAM89BQ8N5H3 189 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 STOML3Q8TAV4 291 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 LRRC46Q96FV0 321 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 OR10A2Q9H208 303 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 PIGMQ9H3S5 423 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 PCDHB10Q9UN67 800 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 PRELID1Q9Y255 219 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 LY6G6EA0A0G2JKS1 128 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 H0YIZ8 118 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 DNASE2O00115 360 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-228ENST00000524023 TOR1AO14656 332 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 FGF16O43320 207 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 TLX3O43711 291 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-228ENST00000524023 WDPCPO95876 746 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 IGLV3-1P01715 115 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 FPR2P25090 351 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 CTSSP25774 331 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 FKBP2P26885 142 aaKnown RBP9.75□□□□□ -0.85
HDAC9-228ENST00000524023 DEFA5Q01523 94 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 MC2RQ01718 297 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 ECH1Q13011 328 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 ARFRP1Q13795 201 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 KISS1Q15726 138 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 SGCAQ16586 387 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 DMRTC1Q5HYR2 192 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 PRAMEF20Q5VT98 475 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 FAM122CQ6P4D5 195 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 CRIP3Q6Q6R5 217 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 TMPPEQ6ZT21 453 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 PEG10Q86TG7 708 aaKnown RBP9.75□□□□□ -0.85
HDAC9-228ENST00000524023 LHFPL1Q86WI0 220 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 CCDC36Q8IYA8 594 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 OR51T1Q8NGJ9 327 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 OR1S2Q8NGQ3 325 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 OR5H2Q8NGV7 314 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 OR13G1Q8NGZ3 307 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 MARC2Q969Z3 335 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 PGAM5Q96HS1 289 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 LYZL4Q96KX0 146 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 CDC6Q99741 560 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 RTBDNQ9BSG5 229 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-228ENST00000524023 SLC26A1Q9H2B4 701 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 UBE2ZQ9H832 354 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-228ENST00000524023 AKIRIN1Q9H9L7 192 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-228ENST00000524023 ZC4H2Q9NQZ6 224 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 FLVCR1Q9Y5Y0 555 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 CHCHD2Q9Y6H1 151 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-228ENST00000524023 U3KQA8 63 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 PI4KAP42356 2102 aa9.75□□□□□ -0.85
HDAC9-228ENST00000524023 A0A0B4J2A0 478 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 FOXI3A8MTJ6 420 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-228ENST00000524023 PRF1P14222 555 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 PI3P19957 117 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 AMY2BP19961 511 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 ALDH3B1P43353 468 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 DHPSP49366 369 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-228ENST00000524023 LSM6P62312 80 aaKnown RBP9.74□□□□□ -0.85
HDAC9-228ENST00000524023 SUPT4H1P63272 117 aaKnown RBP9.74□□□□□ -0.85
HDAC9-228ENST00000524023 EIF3IQ13347 325 aaKnown RBP9.74□□□□□ -0.85
HDAC9-228ENST00000524023 SLC9A3R2Q15599 337 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 UQCC3Q6UW78 93 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 C1QL2Q7Z5L3 287 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 PPP1R3BQ86XI6 285 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 BOLLQ8N9W6 283 aaKnown RBP9.74□□□□□ -0.85
HDAC9-228ENST00000524023 PNLDC1Q8NA58 520 aaKnown RBP9.74□□□□□ -0.85
HDAC9-228ENST00000524023 ZSCAN4Q8NAM6 433 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-228ENST00000524023 OR5D18Q8NGL1 313 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 ROBO4Q8WZ75 1007 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 RRNAD1Q96FB5 475 aaKnown RBP9.74□□□□□ -0.85
HDAC9-228ENST00000524023 LIN37Q96GY3 246 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-228ENST00000524023 CCDC74BQ96LY2 380 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 SCGB3A2Q96PL1 93 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 RAB18Q9NP72 206 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 SHPKQ9UHJ6 478 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 RAB19A4D1S5 217 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 ATP6V1G2-DDX39BF2Z307 99 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 TP53I11O14683 189 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 ADAP1O75689 374 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 NAT2P11245 290 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 TPT1P13693 172 aaKnown RBP9.74□□□□□ -0.85
HDAC9-228ENST00000524023 EPHA8P29322 1005 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-228ENST00000524023 PTGFRP43088 359 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 ARHGDIBP52566 201 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 H3F3AP84243 136 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 AADACL3Q5VUY0 350 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 MRPL14Q6P1L8 145 aaKnown RBP9.74□□□□□ -0.85
HDAC9-228ENST00000524023 SLC30A7Q8NEW0 376 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 NARS2Q96I59 477 aaKnown RBP9.74□□□□□ -0.85
HDAC9-228ENST00000524023 ST6GALNAC5Q9BVH7 336 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 DUSP23Q9BVJ7 150 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 ZNF160Q9HCG1 818 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.74□□□□□ -0.85
HDAC9-228ENST00000524023 CYTL1Q9NRR1 136 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms