RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 HBQ1P09105 142 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 CCDC159P0C7I6 412 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 ZNF806P0C7X5 589 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 OR8G3PP0DMU2 310 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 PAX1P15863 534 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 HOXB6P17509 224 aaKnown RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 MYL12AP19105 171 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 PGCP20142 388 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 ACP1P24666 158 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 DCKP27707 260 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 GTF2E2P29084 291 aaKnown RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 ACVR1BP36896 505 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 OPRL1P41146 370 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 PTGDSP41222 190 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 SLC1A3P43003 542 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 MAGEA8P43361 318 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 MAGEB1P43366 347 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 OR3A1P47881 315 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 NOVA1P51513 510 aaKnown RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 SSR4P51571 173 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 POLR2HP52434 150 aaKnown RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 SNRPGP62308 76 aaKnown RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 RPS15P62841 145 aaKnown RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 PMP22Q01453 160 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 POU3F1Q03052 451 aaPredicted RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 TRA2AQ13595 282 aaKnown RBP eCLIP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 KRR1Q13601 381 aaKnown RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 C1DQ13901 141 aaKnown RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 ZNF74Q16587 644 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 ZNF528Q3MIS6 628 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 KIAA1644Q3SXP7 199 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 TMEM176BQ3YBM2 270 aaPredicted RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 MESTQ5EB52 335 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 SLC35D3Q5M8T2 416 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 FAM27D1Q5T7N8 215 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 C9orf135Q5VTT2 229 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 AADACL4Q5VUY2 407 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 C1orf140Q5VVS0 124 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 C22orf42Q6IC83 251 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 SPINK14Q6IE38 97 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 NIPAL3Q6P499 406 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 ZCCHC12Q6PEW1 402 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 ZNF613Q6PF04 617 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 ULK3Q6PHR2 472 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 RTL4Q6ZR62 310 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 USP43Q70EL4 1123 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 SLC35D2Q76EJ3 337 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 BTN2A1Q7KYR7 527 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 PRSS48Q7RTY5 328 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 ERI1Q8IV48 349 aaKnown RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 SLC35F2Q8IXU6 374 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 ZNF440Q8IYI8 595 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 LINC00471Q8N535 108 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 PROKR2Q8NFJ6 384 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 OR2M3Q8NG83 312 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 OR8J1Q8NGP2 316 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 OR13C3Q8NGS6 347 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 OR6N2Q8NGY6 317 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 OR5J2Q8NH18 312 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 OR8K3Q8NH51 312 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 OR5W2Q8NH69 310 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 SLC22A8Q8TCC7 542 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 HPSE2Q8WWQ2 592 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 POP5Q969H6 163 aaKnown RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 C4orf36Q96KX1 117 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 TSPAN32Q96QS1 320 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 OR5B2Q96R09 309 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 SECISBP2Q96T21 854 aaKnown RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 MGLLQ99685 303 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 GAL3ST1Q99999 423 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 POLR2J2Q9GZM3 115 aaKnown RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 C6orf62Q9GZU0 229 aaPredicted RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 HOXD1Q9GZZ0 328 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 CHRNA10Q9GZZ6 450 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 DCSTAMPQ9H295 470 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 SYT4Q9H2B2 425 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 TPK1Q9H3S4 243 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 DUSP21Q9H596 190 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 GPN2Q9H9Y4 310 aaPredicted RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 CCNB1IP1Q9NPC3 277 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 POLE4Q9NR33 117 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 DEPPQ9NTK1 212 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 MED17Q9NVC6 651 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 FKBP14Q9NWM8 211 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 HPF1Q9NWY4 346 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 MED29Q9NX70 200 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 GNG8Q9UK08 70 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 IKZF2Q9UKS7 526 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 CLEC4AQ9UMR7 237 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 COPS3Q9UNS2 423 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 CFL2Q9Y281 166 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 ERGIC3Q9Y282 383 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 FARSAQ9Y285 508 aaKnown RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 SLC35A3Q9Y2D2 325 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 NSG2Q9Y328 171 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 CAB39Q9Y376 341 aaPredicted RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 RPL36Q9Y3U8 105 aaKnown RBP2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 HSPE1-MOB4S4R3N1 261 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 ZNF407Q9C0G0 2248 aa2.31□□□□□ -2.04
CKS1BP7-201ENST00000522230 COL6A3P12111 3177 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms