RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 POU6F1Q14863 301 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 LY6EQ16553 131 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 TNFAIP8L3Q5GJ75 292 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 FAM78AQ5JUQ0 283 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 TTC33Q6PID6 262 aaPredicted RBP2.93□□□□□ -1.94
SKP1-208ENST00000521216 CEMP1Q6PRD7 247 aaPredicted RBP2.93□□□□□ -1.94
SKP1-208ENST00000521216 PLET1Q6UQ28 207 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 LINC00299Q6ZSB3 139 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 TMCO2Q7Z6W1 182 aaPredicted RBP2.93□□□□□ -1.94
SKP1-208ENST00000521216 KIF2BQ8N4N8 673 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 RNF182Q8N6D2 247 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 UBA3Q8TBC4 463 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 CPNE4Q96A23 557 aaPredicted RBP2.93□□□□□ -1.94
SKP1-208ENST00000521216 OTUB2Q96DC9 234 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 OR5B12Q96R08 314 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 ZNF382Q96SR6 550 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 MTG1Q9BT17 334 aaPredicted RBP2.93□□□□□ -1.94
SKP1-208ENST00000521216 ZNF717Q9BY31 904 aaPredicted RBP2.93□□□□□ -1.94
SKP1-208ENST00000521216 DERL2Q9GZP9 239 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 ALX4Q9H161 411 aaPredicted RBP2.93□□□□□ -1.94
SKP1-208ENST00000521216 BLZF1Q9H2G9 400 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 PIGUQ9H490 435 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 TREM1Q9NP99 234 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 ZDHHC4Q9NPG8 344 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 RGS18Q9NS28 235 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 RSL24D1Q9UHA3 163 aaKnown RBP2.93□□□□□ -1.94
SKP1-208ENST00000521216 GLS2Q9UI32 602 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 STOML2Q9UJZ1 356 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 SLC22A14Q9Y267 594 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 ARL2BPQ9Y2Y0 163 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 ASB4Q9Y574 426 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 V9GYQ6 96 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 EPRSP07814 1512 aaKnown RBP2.93□□□□□ -1.94
SKP1-208ENST00000521216 DAPK1P53355 1430 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 BLMP54132 1417 aaPredicted RBP2.93□□□□□ -1.94
SKP1-208ENST00000521216 CLUHO75153 1309 aa2.93□□□□□ -1.94
SKP1-208ENST00000521216 NUP214P35658 2090 aaPredicted RBP2.92□□□□□ -1.94
SKP1-208ENST00000521216 ITSN2Q9NZM3 1697 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 CABIN1Q9Y6J0 2220 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 INO80Q9ULG1 1556 aaPredicted RBP2.92□□□□□ -1.94
SKP1-208ENST00000521216 CCDC18Q5T9S5 1454 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 GLYATL1P3A0A0U1RQE8 302 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 C7orf66A4D0T2 115 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 VPS37CA5D8V6 355 aaPredicted RBP2.92□□□□□ -1.94
SKP1-208ENST00000521216 SIGLEC16A6NMB1 481 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 IQCF5A8MTL0 148 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 ZNF705GA8MUZ8 300 aaPredicted RBP2.92□□□□□ -1.94
SKP1-208ENST00000521216 E5RI56 91 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 RAB29O14966 203 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 MRPS12O15235 138 aaKnown RBP2.92□□□□□ -1.94
SKP1-208ENST00000521216 RBFOX2O43251 390 aaKnown RBP eCLIP2.92□□□□□ -1.942e-14■■■■■ 49.8
SKP1-208ENST00000521216 CST8O60676 142 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 CCNKO75909 580 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 DCTN3O75935 186 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 TNNC2P02585 160 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 OR4E1P0C645 316 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 UQCRFS1P1P0C7P4 283 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 RALBP11234 206 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 MLNP12872 115 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 CBR1P16152 277 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 TCP1P17987 556 aaKnown RBP2.92□□□□□ -1.94
SKP1-208ENST00000521216 RAB3BP20337 219 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 S100PP25815 95 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 RPL5P46777 297 aaKnown RBP2.92□□□□□ -1.94
SKP1-208ENST00000521216 CX3CR1P49238 355 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 SERPINB9P50453 376 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 RAB13P51153 203 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 ZNF138P52744 262 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 TAS2R60P59551 318 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 MXD1Q05195 221 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 SMCO1Q147U7 214 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 UAP1Q16222 522 aaPredicted RBP2.92□□□□□ -1.94
SKP1-208ENST00000521216 ZNF684Q5T5D7 378 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 C5orf46Q6UWT4 87 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 DCXRQ7Z4W1 244 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 HORMAD1Q86X24 394 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 GID4Q8IVV7 300 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 UBALD2Q8IYN6 164 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 MICU2Q8IYU8 434 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 ZNF615Q8N8J6 731 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 ASCC1Q8N9N2 400 aaKnown RBP2.92□□□□□ -1.94
SKP1-208ENST00000521216 OR10J6PQ8NGY7 276 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 RNASE11Q8TAA1 199 aaKnown RBP2.92□□□□□ -1.94
SKP1-208ENST00000521216 YIPF5Q969M3 257 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 TPD52L3Q96J77 140 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 C9orf72Q96LT7 481 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 CSPG4P5Q96PW8 444 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 SCRT1Q9BWW7 348 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 RACGAP1Q9H0H5 632 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 PARP12Q9H0J9 701 aaKnown RBP2.92□□□□□ -1.94
SKP1-208ENST00000521216 DDX19AQ9NUU7 478 aaKnown RBP2.92□□□□□ -1.94
SKP1-208ENST00000521216 RAB23Q9ULC3 237 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 TMEM14AQ9Y6G1 99 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 ZNF532Q9HCE3 1301 aa2.92□□□□□ -1.94
SKP1-208ENST00000521216 CCDC141Q6ZP82 1450 aa2.91□□□□□ -1.94
SKP1-208ENST00000521216 CHD1O14646 1710 aa2.91□□□□□ -1.94
SKP1-208ENST00000521216 SERTM2A0A1B0GWG4 89 aa2.91□□□□□ -1.94
SKP1-208ENST00000521216 A0A1W2PRG6 482 aa2.91□□□□□ -1.94
SKP1-208ENST00000521216 RAB19A4D1S5 217 aa2.91□□□□□ -1.94
SKP1-208ENST00000521216 COLCA2A8K830 154 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms