RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 MED30Q96HR3 178 aa13.39□□□□□ -0.27
TRAM1-204ENST00000521049 DDOQ99489 341 aa13.39□□□□□ -0.27
TRAM1-204ENST00000521049 COPS4Q9BT78 406 aa13.39□□□□□ -0.27
TRAM1-204ENST00000521049 TLNRD1Q9H1K6 362 aa13.39□□□□□ -0.27
TRAM1-204ENST00000521049 FN3KQ9H479 309 aa13.39□□□□□ -0.27
TRAM1-204ENST00000521049 HAO2Q9NYQ3 351 aa13.39□□□□□ -0.27
TRAM1-204ENST00000521049 KMT2CQ8NEZ4 4911 aaKnown RBP13.39□□□□□ -0.27
TRAM1-204ENST00000521049 CDIPTO14735 213 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 GSK3BP49841 420 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 SLC7A2P52569 658 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 SMIM11AP58511 58 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 FAM3AP98173 230 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRAM1-204ENST00000521049 BLMHQ13867 455 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 TAF13Q15543 124 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 DCXRQ7Z4W1 244 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 ZDHHC21Q8IVQ6 265 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 OR4S1Q8NGB4 309 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 OR5T2Q8NGG2 359 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 OR51G2Q8NGK0 314 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 H1FXQ92522 213 aaKnown RBP13.38□□□□□ -0.27
TRAM1-204ENST00000521049 SGCDQ92629 289 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 CLPTM1LQ96KA5 538 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 N6AMT1Q9Y5N5 214 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 CAPN7Q9Y6W3 813 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 NBEAL2Q6ZNJ1 2754 aa13.38□□□□□ -0.27
TRAM1-204ENST00000521049 PLXNB1O43157 2135 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 NDUFAB1O14561 156 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 SLC2A1P11166 492 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 CSNK2BP67870 215 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 LY6EQ16553 131 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 LRRC75BQ2VPJ9 315 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 VAX1Q5SQQ9 334 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 C8orf82Q6P1X6 216 aaPredicted RBP13.37□□□□□ -0.27
TRAM1-204ENST00000521049 ZNF788Q6ZQV5 615 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 SLC16A9Q7RTY1 509 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 PROKR2Q8NFJ6 384 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 OR10Z1Q8NGY1 313 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 OR2T4Q8NH00 348 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 SGK3Q96BR1 496 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 SLAMF6Q96DU3 332 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 AJUBAQ96IF1 538 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 RAB3IPQ96QF0 476 aaPredicted RBP13.37□□□□□ -0.27
TRAM1-204ENST00000521049 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.37□□□□□ -0.274e-7■■■■■ 45.1
TRAM1-204ENST00000521049 CENPMQ9NSP4 180 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 ZNF446Q9NWS9 450 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 AURKAIP1Q9NWT8 199 aaPredicted RBP13.37□□□□□ -0.27
TRAM1-204ENST00000521049 SLC25A10Q9UBX3 287 aaPredicted RBP13.37□□□□□ -0.27
TRAM1-204ENST00000521049 CD300AQ9UGN4 299 aa13.37□□□□□ -0.27
TRAM1-204ENST00000521049 TVP23AA6NH52 213 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 DIRAS1O95057 198 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 VSIG10L2P0DP72 767 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 SELLP14151 372 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 NCK1P16333 377 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 PYCR1P32322 319 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 IFNGR2P38484 337 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 CAV3P56539 151 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 TEX30Q5JUR7 227 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 SLC35F1Q5T1Q4 408 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 HCP5Q6MZN7 132 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 LIAT1Q6ZQX7 453 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 OR5D13Q8NGL4 314 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 C17orf50Q8WW18 174 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 ZNRF4Q8WWF5 429 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 ITPKCQ96DU7 683 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 DUS3LQ96G46 650 aaKnown RBP13.36□□□□□ -0.27
TRAM1-204ENST00000521049 NPFFR1Q9GZQ6 430 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 TOR3AQ9H497 397 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 SP140LQ9H930 580 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 DCAF13Q9NV06 445 aaKnown RBP13.36□□□□□ -0.27
TRAM1-204ENST00000521049 ZNF391Q9UJN7 358 aa13.36□□□□□ -0.27
TRAM1-204ENST00000521049 NKX6-3A6NJ46 265 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 TBX1O43435 398 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 GADD45GO95257 159 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 ACAA1P09110 424 aaPredicted RBP13.35□□□□□ -0.27
TRAM1-204ENST00000521049 CFL1P23528 166 aaKnown RBP13.35□□□□□ -0.27
TRAM1-204ENST00000521049 POU1F1P28069 291 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 SLC15A1P46059 708 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 GSSP48637 474 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 IL5RAQ01344 420 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 SNCBQ16143 134 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 DGUOKQ16854 277 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 TIGD6Q17RP2 521 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 GLYATQ6IB77 296 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 CSNK2A3Q8NEV1 391 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 ANGPTL6Q8NI99 470 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 RORBQ92753 470 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 REEP6Q96HR9 211 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 GAFA1Q96PS6 74 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 MICU1Q9BPX6 476 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 KCTD14Q9BQ13 255 aaPredicted RBP13.35□□□□□ -0.27
TRAM1-204ENST00000521049 EFCAB1Q9HAE3 211 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 SNTG1Q9NSN8 517 aa13.35□□□□□ -0.27
TRAM1-204ENST00000521049 SAMD4AQ9UPU9 718 aaKnown RBP13.35□□□□□ -0.27
TRAM1-204ENST00000521049 A0A1W2PQ09 198 aa13.34□□□□□ -0.27
TRAM1-204ENST00000521049 ZNF878C9JN71 531 aa13.34□□□□□ -0.27
TRAM1-204ENST00000521049 ZNF593O00488 134 aaPredicted RBP13.34□□□□□ -0.27
TRAM1-204ENST00000521049 SIGLEC5O15389 551 aa13.34□□□□□ -0.27
TRAM1-204ENST00000521049 APOC1P02654 83 aa13.34□□□□□ -0.27
TRAM1-204ENST00000521049 PSKH1P11801 424 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms