RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 MPC2O95563 127 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 ABHD16AO95870 558 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 LALBAP00709 142 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 IGKV3-15P01624 115 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 HLA-DPB1P04440 258 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 HLA-DOBP13765 273 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 PRKACAP17612 351 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 CD53P19397 219 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 GRNP28799 593 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 CALCRP30988 508 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 APOBEC3AP31941 199 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 BTCP35070 178 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 HTR5AP47898 357 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 FABP6P51161 128 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 IDH3GP51553 393 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 GRB2P62993 217 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 ACTC1P68032 377 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 ACTA1P68133 377 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 CDK5Q00535 292 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 BDH1Q02338 343 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 LTBQ06643 244 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 RAB35Q15286 201 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 PCGF3Q3KNV8 242 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 ZNF718Q3SXZ3 478 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 HIKESHIQ53FT3 197 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 SHEQ5VZ18 495 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 PYHIN1Q6K0P9 492 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 PLXDC2Q6UX71 529 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 BTN2A1Q7KYR7 527 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 FAM220AQ7Z4H9 259 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 LRRC28Q86X40 367 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 CDC20BQ86Y33 519 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 LINC00518Q8N0U6 118 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 LRRC75A-AS1Q8N1F1 130 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 MUC15Q8N387 334 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 EIF4E3Q8N5X7 224 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 TCEANCQ8N8B7 351 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 OR11H4Q8NGC9 324 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 OR52H1Q8NGJ2 320 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 OR6K6Q8NGW6 343 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 OR52N1Q8NH53 320 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 GIMAP1Q8WWP7 306 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 ST8SIA4Q92187 359 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 PHF21AQ96BD5 680 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 MBD6Q96DN6 1003 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 LURAP1Q96LR2 239 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 Q96M85 177 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 INTS14Q96SY0 518 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 WFDC6Q9BQY6 131 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 DPCDQ9BVM2 203 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 HCAR1Q9BXC0 346 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 TMPRSS13Q9BYE2 586 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 EGLN1Q9GZT9 426 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 RAB1BQ9H0U4 201 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 ZC4H2Q9NQZ6 224 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 DLL4Q9NR61 685 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 CBLN4Q9NTU7 201 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 CISD1Q9NZ45 108 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 ZMAT5Q9UDW3 170 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 ADAM18Q9Y3Q7 739 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 CACNG2Q9Y698 323 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 SESN1Q9Y6P5 492 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 DOPEY2Q9Y3R5 2298 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 TENM4Q6N022 2769 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 INTS1Q8N201 2190 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 KIAA1549Q9HCM3 1950 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 A8MXK9 166 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 ZNF878C9JN71 531 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 C19orf84I3L1E1 186 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 IFNL4K9M1U5 179 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 GABRPO00591 440 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 BHLHE40O14503 412 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 GSTZ1O43708 216 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 TLX2O43763 284 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 PRAF2O60831 178 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 B3GALNT1O75752 331 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 GLCEO94923 617 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 SOX14O95416 240 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 SLC2A10O95528 541 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 PAHP00439 452 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 F12P00748 615 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 IGLV1-44P01699 117 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 HLA-HP01893 362 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 TCRBP04435 133 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 ACSM4P0C7M7 580 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 LIMS3P0CW19 117 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 LIMS4P0CW20 117 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 HIST1H1CP16403 213 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 ELK1P19419 428 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 CCNOP22674 350 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 CCKARP32238 428 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 SERPINF1P36955 418 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 NUP62P37198 522 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 GIPRP48546 466 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 KLF3P57682 345 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 S100A12P80511 92 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 FLI1Q01543 452 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 NAAAQ02083 359 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 SLC3A1Q07837 685 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms