RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 NAB1Q13506 487 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 Q5W150 140 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 NANOGP8Q6NSW7 305 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 BHLHA15Q7RTS1 189 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 OR1J4Q8NGS1 313 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 ZFAND1Q8TCF1 268 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 TMIGD2Q96BF3 282 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 ZBED3Q96IU2 234 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 KCNS1Q96KK3 526 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 RSG1Q9BU20 258 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 SFXN3Q9BWM7 321 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 ULBP2Q9BZM5 246 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 CHRNA10Q9GZZ6 450 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 ARV1Q9H2C2 271 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 VCXQ9H320 206 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 C1orf198Q9H425 327 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 C6orf50Q9HD87 102 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 VAPAQ9P0L0 249 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 KLK12Q9UKR0 248 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 RBMX2Q9Y388 322 aaKnown RBP3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 PTPRTO14522 1441 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 ATRXP46100 2492 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 TET2Q6N021 2002 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 ERICH4A6NGS2 130 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 ZNF705GA8MUZ8 300 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 H0YJW9 148 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 MED6O75586 246 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 VAMP5O95183 116 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 PAHP00439 452 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 TRBV12-3P01733 135 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 IGHV3-11P01762 117 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 HLA-DQA1P01909 254 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 ZNF688P0C7X2 276 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 APLNRP35414 380 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 TNNC1P63316 161 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 CYP24A1Q07973 514 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 TAL2Q16559 108 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 NDUFAF6Q330K2 333 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 APOBEC3HQ6NTF7 200 aaKnown RBP3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 Q6ZR03 302 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 OR6K2Q8NGY2 324 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 OR52P1PQ8NH57 321 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 OR1S1Q8NH92 325 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 UBALD1Q8TB05 177 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 ENKURQ8TC29 256 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 LGALS14Q8TCE9 139 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 RXFP2Q8WXD0 754 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 SDHCQ99643 169 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 GABRG3Q99928 467 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 KCNS3Q9BQ31 491 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 GGTLC1Q9BX51 225 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 HINT2Q9BX68 163 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 FGF23Q9GZV9 251 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 VAX2Q9UIW0 290 aa3.31□□□□□ -1.88
HMGB1P46-201ENST00000520062 IGKV1-27A0A075B6S5 117 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 TRAV8-4A0A0B4J246 113 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 IGHV7-4-1A0A0J9YVY3 117 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 RAB19A4D1S5 217 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 NDUFC2-KCTD14E9PQ53 114 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 MYL12BO14950 172 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 ZMPSTE24O75844 475 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 P01737 135 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 C1GALT1C1LP0DN25 315 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 KCNJ3P48549 501 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 INCA1Q0VD86 236 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 PSG3Q16557 428 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 MFSD14CQ5VZR4 134 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 THOC7Q6I9Y2 204 aaKnown RBP3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 MDP1Q86V88 176 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 UBALD2Q8IYN6 164 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 SLC7A5P1Q8MH63 180 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 CA13Q8N1Q1 262 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 CDKL2Q92772 493 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 RBBP8Q99708 897 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 NAPGQ99747 312 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 UTP23Q9BRU9 249 aaKnown RBP3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 ZNF430Q9H8G1 570 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 SLC38A10Q9HBR0 1119 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 EXOSC4Q9NPD3 245 aaKnown RBP3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 HEBP1Q9NRV9 189 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 ZNF229Q9UJW7 825 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 SIGLEC7Q9Y286 467 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 ACOT9Q9Y305 439 aa3.3□□□□□ -1.88
HMGB1P46-201ENST00000520062 LRP4O75096 1905 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 IGSF9BQ9UPX0 1349 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 IGHV3-72A0A0B4J1Y9 119 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 ZNF593O00488 134 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 BET1O15155 118 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 RBFOX2O43251 390 aaKnown RBP eCLIP3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 EIF1BO60739 113 aaKnown RBP3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 MT-ND4P03905 459 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 EIF1P41567 113 aaKnown RBP3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 CXCL12P48061 93 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 DNASE1L1P49184 302 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 TAS2R31P59538 309 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 LRRC63Q05C16 580 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 SNRNP35Q16560 246 aaKnown RBP3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 FAM27D1Q5T7N8 215 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 TMEM236Q5W0B7 351 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 OPN5Q6U736 354 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms