RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 INIPQ9NRY2 104 aa4.98□□□□□ -1.61
PABPC1-207ENST00000518716 TMEM106BQ9NUM4 274 aa4.98□□□□□ -1.61
PABPC1-207ENST00000518716 TMEM38BQ9NVV0 291 aa4.98□□□□□ -1.61
PABPC1-207ENST00000518716 GLTPQ9NZD2 209 aa4.98□□□□□ -1.61
PABPC1-207ENST00000518716 ERVK-18Q9QC07 812 aa4.98□□□□□ -1.61
PABPC1-207ENST00000518716 ZNF443Q9Y2A4 671 aaPredicted RBP4.98□□□□□ -1.61
PABPC1-207ENST00000518716 STAB2Q8WWQ8 2551 aa4.98□□□□□ -1.61
PABPC1-207ENST00000518716 LOC100509620A0A075B734 347 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 A0A1B0GWA3 101 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 ISPDA4D126 451 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 CEACAM18A8MTB9 384 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 H3BSA7 217 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 DHHO43323 396 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 TPST2O60704 377 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 CH25HO95992 272 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 MT-ATP6P00846 226 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 CRYBA1P05813 215 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 OR4E1P0C645 316 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 IL12AP29459 219 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 CHI3L1P36222 383 aaPredicted RBP4.97□□□□□ -1.61
PABPC1-207ENST00000518716 SERPINB5P36952 375 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 LIPAP38571 399 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 MAGEA2P43356 314 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 CSNK1A1P48729 337 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 BTG1P62324 171 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 PUDPQ08623 228 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 MAD2L1Q13257 205 aaPredicted RBP4.97□□□□□ -1.61
PABPC1-207ENST00000518716 SSX2Q16385 188 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 C1orf146Q5VVC0 180 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 PYHIN1Q6K0P9 492 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 KRTAP5-11Q6L8G4 156 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 Q6ZR03 302 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 Q6ZSV7 163 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 HDDC2Q7Z4H3 204 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 VTCN1Q7Z7D3 282 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 GID4Q8IVV7 300 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 FITM2Q8N6M3 262 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 NHLRC2Q8NBF2 726 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 OR1J2Q8NGS2 313 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 OR1J1Q8NGS3 322 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 OR6N1Q8NGY5 312 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 KLF14Q8TD94 323 aaPredicted RBP4.97□□□□□ -1.61
PABPC1-207ENST00000518716 SLC38A4Q969I6 547 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 RNFT2Q96EX2 444 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 AJUBAQ96IF1 538 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 ARHGDIGQ99819 225 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 EGLN1Q9GZT9 426 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 OR51B6Q9H340 312 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 CDH20Q9HBT6 801 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 BCL2L10Q9HD36 194 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 A4GALTQ9NPC4 353 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.97□□□□□ -1.61
PABPC1-207ENST00000518716 CYSLTR2Q9NS75 346 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 UFSP2Q9NUQ7 469 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 ZDHHC8Q9ULC8 765 aa4.97□□□□□ -1.61
PABPC1-207ENST00000518716 HUWE1Q7Z6Z7 4374 aaKnown RBP4.96□□□□□ -1.61
PABPC1-207ENST00000518716 TENM2Q9NT68 2774 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 TET2Q6N021 2002 aaPredicted RBP4.96□□□□□ -1.62
PABPC1-207ENST00000518716 TRAV40A0A0B4J280 105 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 ZNF726A6NNF4 738 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 LRRN3E7EW58 273 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 TMEM178BH3BS89 294 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 COPEO14579 308 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 GPR137BO60478 399 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 SERPINB7O75635 380 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 PTHP01270 115 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 SHBGP04278 402 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 STAG3L2P0CL84 134 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 PGA4P0DJD7 388 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 PGA3P0DJD8 388 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 ETFAP13804 333 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 MMP9P14780 707 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 NCF2P19878 526 aaPredicted RBP4.96□□□□□ -1.62
PABPC1-207ENST00000518716 DRD4P21917 467 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 MDH2P40926 338 aaKnown RBP4.96□□□□□ -1.62
PABPC1-207ENST00000518716 IER3P46695 156 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 BIDP55957 195 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 MXRA7P84157 204 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 PSG7Q13046 419 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 SMCO1Q147U7 214 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 LARS2Q15031 903 aaKnown RBP4.96□□□□□ -1.62
PABPC1-207ENST00000518716 TBCEQ15813 527 aaPredicted RBP4.96□□□□□ -1.62
PABPC1-207ENST00000518716 FAM189A2Q15884 450 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 LRRC36Q1X8D7 754 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 TBC1D28Q2M2D7 210 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 C2orf68Q2NKX9 166 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 ZNF718Q3SXZ3 478 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 GTDC1Q4AE62 458 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 ESCO2Q56NI9 601 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 SPANXN2Q5MJ10 180 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 CST9LP1Q5W188 147 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 FAM91A1Q658Y4 838 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 RUSC1-AS1Q66K80 236 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 ZNF841Q6ZN19 808 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 PLEKHG7Q6ZR37 379 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 GPR141Q7Z602 305 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 CCDC28AQ8IWP9 274 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 RNF152Q8N8N0 203 aa4.96□□□□□ -1.62
PABPC1-207ENST00000518716 ASCC1Q8N9N2 400 aaKnown RBP4.96□□□□□ -1.62
PABPC1-207ENST00000518716 OR4K5Q8NGD3 323 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms