RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 SLC2A5P22732 501 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 RBM34P42696 430 aaKnown RBP-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 ERHP84090 104 aaKnown RBP-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 BST1Q10588 318 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 CUL4AQ13619 759 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 HFEQ30201 348 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 KRTAP6-2Q3LI66 62 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 FAM229BQ4G0N7 80 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 TP53I3Q53FA7 332 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 C10orf55Q5SWW7 151 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 PRAMEF7Q5VXH5 474 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 FAM205BPQ63HN1 556 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR4F3Q6IEY1 312 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 C16orf54Q6UWD8 224 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 B3GLCTQ6Y288 498 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 TBC1D21Q8IYX1 336 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 DRAM1Q8N682 238 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 ZFAND2AQ8N6M9 145 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 C9orf163Q8N9P6 203 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 GPR26Q8NDV2 337 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 SLC30A7Q8NEW0 376 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR9I1Q8NGQ6 314 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 LHFPL5Q8TAF8 219 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 NDNFQ8TB73 568 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 GPR21Q99679 349 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 CHCHD6Q9BRQ6 235 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 NIPSNAP3BQ9BS92 247 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 IL22Q9GZX6 179 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 ABCG4Q9H172 646 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 TUFT1Q9NNX1 390 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 ADAM28Q9UKQ2 775 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 CEP170Q5SW79 1584 aa-2.8□□□□□ -2.86
RNU6-539P-201ENST00000516665 A0A0U1RRA0 63 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 SYNGR1O43759 233 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 ATP6V1G1O75348 118 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 CRCPO75575 148 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 KRT75O95678 551 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 PGCP20142 388 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 TPSB2P20231 275 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 IL12AP29459 219 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 BMI1P35226 326 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 TUFMP49411 452 aaKnown RBP-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 SERPINH1P50454 418 aaKnown RBP-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 RND2P52198 227 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 UGT2B15P54855 530 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR2B6P58173 313 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 ATP5G2Q06055 141 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 TMEM267Q0VDI3 215 aaPredicted RBP-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 TPSAB1Q15661 275 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 MAPK6Q16659 721 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 NDUFAF6Q330K2 333 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 PRAMEF8Q5VWM4 474 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 TPGS2Q68CL5 300 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 VPS36Q86VN1 386 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 DHRSXQ8N5I4 330 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 NHLRC2Q8NBF2 726 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR10R2Q8NGX6 335 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 KIF18AQ8NI77 898 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 LRRC29Q8WV35 223 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 TBATAQ96M53 351 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 PPM1MQ96MI6 270 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 TSPAN32Q96QS1 320 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 NXF5Q9H1B4 397 aaKnown RBP-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 AIPL1Q9NZN9 384 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 NDUFA13Q9P0J0 144 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 PCSK1NQ9UHG2 260 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 SLC7A8Q9UHI5 535 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 HEY1Q9Y5J3 304 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 COMMD3-BMI1R4GMX3 469 aa-2.81□□□□□ -2.86
RNU6-539P-201ENST00000516665 CCL15-CCL14A0A0B4J2E2 113 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 C13orf42A0A1B0GVH6 325 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 TCRBV9S1A1TA0A576 114 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 TSPAN11A1L157 253 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 CTAGE15A4D2H0 777 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 TRAPPC13A5PLN9 417 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 HSD17B6O14756 317 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 TNRC18O15417 2968 aaPredicted RBP-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 LANCL1O43813 399 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 NMT2O60551 498 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 RDH16O75452 317 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 EIF3GO75821 320 aaKnown RBP eCLIP-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 CXorf1O96002 111 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 FERP16591 822 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 TALDO1P37837 337 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 MAP3K8P41279 467 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 IFI35P80217 286 aaPredicted RBP-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 ZNF90Q03938 601 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 MOGQ16653 247 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 CCL15Q16663 113 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 KYNUQ16719 465 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 GDF5OSQ5U4N7 250 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR6B2Q6IFH4 312 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 TRMT10CQ7L0Y3 403 aaKnown RBP-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 CTAGE6Q86UF2 777 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 ATOH7Q8N100 152 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR6Q1Q8NGQ2 317 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR1L6Q8NGR2 347 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR4A5Q8NH83 315 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 MBD3L1Q8WWY6 194 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 PIK3IP1Q96FE7 263 aa-2.82□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms