RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 SRMSQ9H3Y6 488 aa2.24□□□□□ -2.05
HERC4-215ENST00000515753 SLC25A22Q9H936 323 aa2.24□□□□□ -2.05
HERC4-215ENST00000515753 MTRF1LQ9UGC7 380 aaKnown RBP2.24□□□□□ -2.05
HERC4-215ENST00000515753 HYOU1Q9Y4L1 999 aa2.24□□□□□ -2.05
HERC4-215ENST00000515753 KCNE3Q9Y6H6 103 aa2.24□□□□□ -2.05
HERC4-215ENST00000515753 V9GYY9 64 aa2.24□□□□□ -2.05
HERC4-215ENST00000515753 A0A0G2JMZ2 1700 aa2.24□□□□□ -2.05
HERC4-215ENST00000515753 SPEF2Q9C093 1822 aa2.24□□□□□ -2.05
HERC4-215ENST00000515753 A0A1B0GUL6 1792 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 PSMB11A5LHX3 300 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 TRPC5OSA6NMA1 111 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 HIDE1A8MVS5 230 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 HACD1B0YJ81 288 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 H0YHG0 523 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 K7EMT4 169 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 SLC31A2O15432 143 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 NUPL2O15504 423 aaKnown RBP2.23□□□□□ -2.05
HERC4-215ENST00000515753 GATCO43716 136 aaKnown RBP2.23□□□□□ -2.05
HERC4-215ENST00000515753 DPM1O60762 260 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 SCN2BO60939 215 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 C6orf47O95873 294 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 IGHV3-23P01764 117 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 CATP04040 527 aaKnown RBP2.23□□□□□ -2.05
HERC4-215ENST00000515753 RHOCP08134 193 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 GKN3PP0CG01 181 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 FOLR1P15328 257 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 ZNF3P17036 446 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 PSMC3P17980 439 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 RAB5AP20339 215 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 F2RP25116 425 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 GDF1P27539 372 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 HOXA9P31269 272 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 FMO3P31513 532 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 PCK1P35558 622 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 P2RY2P41231 377 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 RPS9P46781 194 aaKnown RBP2.23□□□□□ -2.05
HERC4-215ENST00000515753 DNASE1L1P49184 302 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 SLC35B1P78383 322 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 ZNF45Q02386 682 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 TGFBR3Q03167 851 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 MXD1Q05195 221 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 ART3Q13508 389 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 KIAA0040Q15053 153 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 KCTD19Q17RG1 926 aaPredicted RBP2.23□□□□□ -2.05
HERC4-215ENST00000515753 GSG1Q2KHT4 349 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 ZBED5Q49AG3 693 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 PAGE3Q5JUK9 113 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 ZNF470Q6ECI4 717 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 MBOAT2Q6ZWT7 520 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 H2AFVQ71UI9 128 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 HSD17B13Q7Z5P4 300 aaPredicted RBP2.23□□□□□ -2.05
HERC4-215ENST00000515753 HORMAD1Q86X24 394 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 CBLN2Q8IUK8 224 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 PNKDQ8N490 385 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 LINC00469Q8N7U9 141 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 OR7G1Q8NGA0 311 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 OR6K2Q8NGY2 324 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 DDI1Q8WTU0 396 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 OR8D1Q8WZ84 308 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 NDRG1Q92597 394 aaKnown RBP2.23□□□□□ -2.05
HERC4-215ENST00000515753 CDKL2Q92772 493 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 TMEM230Q96A57 120 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 LRRC45Q96CN5 670 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 PHYHIPLQ96FC7 376 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 VSIG2Q96IQ7 327 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 FCRL1Q96LA6 429 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 ZNF396Q96N95 335 aaPredicted RBP2.23□□□□□ -2.05
HERC4-215ENST00000515753 ZIM3Q96PE6 472 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 TSG101Q99816 390 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 MICU1Q9BPX6 476 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 AGMATQ9BSE5 352 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 MED10Q9BTT4 135 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 FRMD8P1Q9BZ68 369 aaPredicted RBP2.23□□□□□ -2.05
HERC4-215ENST00000515753 POLR2J2Q9GZM3 115 aaKnown RBP2.23□□□□□ -2.05
HERC4-215ENST00000515753 NDEL1Q9GZM8 345 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 NAA50Q9GZZ1 169 aaKnown RBP2.23□□□□□ -2.05
HERC4-215ENST00000515753 HDHD2Q9H0R4 259 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 POLR2J3Q9H1A7 115 aaKnown RBP2.23□□□□□ -2.05
HERC4-215ENST00000515753 POMKQ9H5K3 350 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 PTGES2Q9H7Z7 377 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 ZNF702PQ9H963 129 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 OR2S2Q9NQN1 319 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 AIG1Q9NVV5 245 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 MARCH5Q9NX47 278 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 CD274Q9NZQ7 290 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 CLCF1Q9UBD9 225 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 ENPP5Q9UJA9 477 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 GGA2Q9UJY4 613 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 SLC25A15Q9Y619 301 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 PLXNB2O15031 1838 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 PHIPQ8WWQ0 1821 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 MYH2Q9UKX2 1941 aa2.23□□□□□ -2.05
HERC4-215ENST00000515753 MGAMO43451 1857 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 LRRK1Q38SD2 2015 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 BRCA2P51587 3418 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 LTBP2Q14767 1821 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 A0A0A6YYD5 115 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 IGKV1D-13A0A0B4J2D9 117 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 IGKV6-21A0A0C4DH24 114 aa2.22□□□□□ -2.05
HERC4-215ENST00000515753 A0A1B0GVI7 797 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms