RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 MALLQ13021 153 aa17.44■□□□□ 0.38
TRIO-223ENST00000515710 TNK1Q13470 666 aa17.44■□□□□ 0.38
TRIO-223ENST00000515710 OR8B8Q15620 311 aa17.44■□□□□ 0.38
TRIO-223ENST00000515710 PNLDC1Q8NA58 520 aaKnown RBP17.44■□□□□ 0.38
TRIO-223ENST00000515710 KCNK15Q9H427 330 aa17.44■□□□□ 0.38
TRIO-223ENST00000515710 ASPMQ8IZT6 3477 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 GGT3PA6NGU5 568 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 FAM87AP0C7U9 286 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 CLVS2Q5SYC1 327 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 AWAT2Q6E213 333 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 BEND4Q6ZU67 534 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 ZNF610Q8N9Z0 462 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 SPSB1Q96BD6 273 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 GPER1Q99527 375 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 OPA3Q9H6K4 179 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 GHRLQ9UBU3 117 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 MRPS28Q9Y2Q9 187 aaKnown RBP17.43■□□□□ 0.38
TRIO-223ENST00000515710 LYRM1O43325 122 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 UBBP0CG47 229 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 CCL2P13500 99 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 ARPC4P59998 168 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 QRFPP83859 136 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 P2RY6Q15077 328 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 CNN3Q15417 329 aaKnown RBP17.43■□□□□ 0.38
TRIO-223ENST00000515710 KISS1Q15726 138 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 TMEM42Q69YG0 159 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 OR2W3Q7Z3T1 314 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 FCAMRQ8WWV6 532 aa17.43■□□□□ 0.38
TRIO-223ENST00000515710 REPIN1Q9BWE0 567 aaKnown RBP17.43■□□□□ 0.38
TRIO-223ENST00000515710 METTL21EPA6NDL7 271 aa17.42■□□□□ 0.38
TRIO-223ENST00000515710 PRRG2O14669 202 aa17.42■□□□□ 0.38
TRIO-223ENST00000515710 CD3GP09693 182 aa17.42■□□□□ 0.38
TRIO-223ENST00000515710 PRKACBP22694 351 aa17.42■□□□□ 0.38
TRIO-223ENST00000515710 BIVMQ86UB2 503 aa17.42■□□□□ 0.38
TRIO-223ENST00000515710 SLC7A5P1Q8MH63 180 aa17.42■□□□□ 0.38
TRIO-223ENST00000515710 C17orf78Q8N4C9 275 aa17.42■□□□□ 0.38
TRIO-223ENST00000515710 SLC30A7Q8NEW0 376 aa17.42■□□□□ 0.38
TRIO-223ENST00000515710 CPNE2Q96FN4 548 aaPredicted RBP17.42■□□□□ 0.38
TRIO-223ENST00000515710 ZC3HAV1LQ96H79 300 aaKnown RBP17.42■□□□□ 0.38
TRIO-223ENST00000515710 TECTBQ96PL2 329 aa17.42■□□□□ 0.38
TRIO-223ENST00000515710 SPACA5Q96QH8 159 aa17.42■□□□□ 0.38
TRIO-223ENST00000515710 TP63Q9H3D4 680 aaPredicted RBP17.42■□□□□ 0.38
TRIO-223ENST00000515710 GPR173Q9NS66 373 aa17.42■□□□□ 0.38
TRIO-223ENST00000515710 RBFOX1Q9NWB1 397 aaKnown RBP17.42■□□□□ 0.38
TRIO-223ENST00000515710 URB1O60287 2271 aaKnown RBP17.41■□□□□ 0.38
TRIO-223ENST00000515710 GMDSO60547 372 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 VSIG8P0DPA2 414 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 ZNF14P17017 642 aaPredicted RBP17.41■□□□□ 0.38
TRIO-223ENST00000515710 HOXC12P31275 282 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 CEACAM8P31997 349 aaPredicted RBP17.41■□□□□ 0.38
TRIO-223ENST00000515710 IFITM2Q01629 132 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 PMPCAQ10713 525 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 MRPL49Q13405 166 aaKnown RBP17.41■□□□□ 0.38
TRIO-223ENST00000515710 TBC1D28Q2M2D7 210 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 GLIPR1L1Q6UWM5 242 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 AKAP14Q86UN6 197 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 TOMM5Q8N4H5 51 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 PAQR4Q8N4S7 273 aaPredicted RBP17.41■□□□□ 0.38
TRIO-223ENST00000515710 APC2O95996 2303 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 ZNF816-ZNF321PA0A0X1KG74 233 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 TMEM14DPA8MWL7 114 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 J3QW42 95 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 SSX4O60224 188 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 SCGNO76038 276 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 SLC34A2O95436 690 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 ALDH3B1P43353 468 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 RAB12Q6IQ22 244 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 DNM1P46Q6ZS02 220 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 RNF144BQ7Z419 303 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 ZNF101Q8IZC7 436 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 OR5L1Q8NGL2 311 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 LILRB4Q8NHJ6 448 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 FAM46BQ96A09 425 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 MS4A3Q96HJ5 214 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 C7orf50Q9BRJ6 194 aaKnown RBP17.41■□□□□ 0.38
TRIO-223ENST00000515710 OPN3Q9H1Y3 402 aaPredicted RBP17.41■□□□□ 0.38
TRIO-223ENST00000515710 STARD10Q9Y365 291 aa17.41■□□□□ 0.38
TRIO-223ENST00000515710 LOC400499M0QZD8 3231 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 TRAV18A0A075B6X5 111 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 ANKRD34BA5PLL1 514 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 CENPXA8MT69 81 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 NRASP01111 189 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 CBR1P16152 277 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 OR3A4PP47883 348 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 FAM189A2Q15884 450 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 RNASE12Q5GAN4 147 aaKnown RBP17.4■□□□□ 0.38
TRIO-223ENST00000515710 OR10K2Q6IF99 312 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 KRT74Q7RTS7 529 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 MRPL21Q7Z2W9 205 aaKnown RBP17.4■□□□□ 0.38
TRIO-223ENST00000515710 DUSP18Q8NEJ0 188 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 OR52I2Q8NH67 350 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 KCNG3Q8TAE7 436 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 ENKURQ8TC29 256 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 SNRNP40Q96DI7 357 aaKnown RBP17.4■□□□□ 0.38
TRIO-223ENST00000515710 ZNF486Q96H40 463 aaPredicted RBP17.4■□□□□ 0.38
TRIO-223ENST00000515710 NEDD4LQ96PU5 975 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 SFXN3Q9BWM7 321 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 OBP2BQ9NPH6 170 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 KCNN3Q9UGI6 736 aa17.4■□□□□ 0.38
TRIO-223ENST00000515710 POU2F3Q9UKI9 436 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms